Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm17836-201ENSMUST00000191976 1302 ntBASIC13.28□□□□□ -0.28
Scn9aQ62205 Gm8968-201ENSMUST00000199133 1303 ntBASIC13.28□□□□□ -0.28
Scn9aQ62205 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.28□□□□□ -0.28
Scn9aQ62205 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn9aQ62205 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn9aQ62205 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC13.28□□□□□ -0.28
Scn9aQ62205 Gm25288-201ENSMUST00000122800 265 ntBASIC13.28□□□□□ -0.28
Scn9aQ62205 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC13.28□□□□□ -0.28
Scn9aQ62205 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC13.28□□□□□ -0.28
Scn9aQ62205 Gm5526-201ENSMUST00000153604 423 ntBASIC13.28□□□□□ -0.28
Scn9aQ62205 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC13.28□□□□□ -0.28
Scn9aQ62205 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC13.28□□□□□ -0.28
Scn9aQ62205 Gm37688-201ENSMUST00000195195 465 ntBASIC13.28□□□□□ -0.28
Scn9aQ62205 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC13.28□□□□□ -0.28
Scn9aQ62205 Gm8873-201ENSMUST00000217847 1439 ntBASIC13.28□□□□□ -0.28
Scn9aQ62205 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC13.28□□□□□ -0.28
Scn9aQ62205 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn9aQ62205 Gm5278-201ENSMUST00000055957 552 ntBASIC13.28□□□□□ -0.28
Scn9aQ62205 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn9aQ62205 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn9aQ62205 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn9aQ62205 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn9aQ62205 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC13.28□□□□□ -0.28
Scn9aQ62205 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn9aQ62205 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Scn9aQ62205 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Scn9aQ62205 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn9aQ62205 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn9aQ62205 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn9aQ62205 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn9aQ62205 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scn9aQ62205 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn9aQ62205 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn9aQ62205 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn9aQ62205 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Scn9aQ62205 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
Scn9aQ62205 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Scn9aQ62205 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn9aQ62205 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Scn9aQ62205 Gm11473-201ENSMUST00000118980 359 ntBASIC13.27□□□□□ -0.28
Scn9aQ62205 Gm24140-201ENSMUST00000122773 326 ntBASIC13.27□□□□□ -0.28
Scn9aQ62205 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn9aQ62205 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn9aQ62205 Gm27444-201ENSMUST00000184157 137 ntBASIC13.27□□□□□ -0.28
Scn9aQ62205 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC13.27□□□□□ -0.28
Scn9aQ62205 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC13.27□□□□□ -0.28
Scn9aQ62205 AC129217.1-201ENSMUST00000225181 642 ntBASIC13.27□□□□□ -0.28
Scn9aQ62205 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn9aQ62205 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC13.27□□□□□ -0.28
Scn9aQ62205 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn9aQ62205 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Scn9aQ62205 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Scn9aQ62205 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn9aQ62205 CT010480.4-201ENSMUST00000224654 2283 ntBASIC13.27□□□□□ -0.28
Scn9aQ62205 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn9aQ62205 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn9aQ62205 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scn9aQ62205 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Scn9aQ62205 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn9aQ62205 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn9aQ62205 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scn9aQ62205 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scn9aQ62205 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Scn9aQ62205 Gm12947-201ENSMUST00000116114 420 ntBASIC13.27□□□□□ -0.29
Scn9aQ62205 Gm23582-201ENSMUST00000158530 139 ntBASIC13.27□□□□□ -0.29
Scn9aQ62205 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn9aQ62205 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn9aQ62205 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC13.27□□□□□ -0.29
Scn9aQ62205 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scn9aQ62205 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC13.27□□□□□ -0.29
Scn9aQ62205 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scn9aQ62205 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scn9aQ62205 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scn9aQ62205 Gm45258-201ENSMUST00000210042 853 ntBASIC13.27□□□□□ -0.29
Scn9aQ62205 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn9aQ62205 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn9aQ62205 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn9aQ62205 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn9aQ62205 AC155245.1-201ENSMUST00000222266 1804 ntBASIC13.26□□□□□ -0.29
Scn9aQ62205 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scn9aQ62205 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Scn9aQ62205 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Scn9aQ62205 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC13.26□□□□□ -0.29
Scn9aQ62205 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn9aQ62205 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scn9aQ62205 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn9aQ62205 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn9aQ62205 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn9aQ62205 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn9aQ62205 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn9aQ62205 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Scn9aQ62205 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Scn9aQ62205 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC13.26□□□□□ -0.29
Scn9aQ62205 Gm18555-201ENSMUST00000197935 584 ntBASIC13.26□□□□□ -0.29
Scn9aQ62205 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC13.26□□□□□ -0.29
Scn9aQ62205 Gm44640-201ENSMUST00000206894 247 ntBASIC13.26□□□□□ -0.29
Scn9aQ62205 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scn9aQ62205 AC134913.2-201ENSMUST00000225017 771 ntBASIC13.26□□□□□ -0.29
Scn9aQ62205 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Scn9aQ62205 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms