Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
VcanQ62059 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.43□□□□□ -0.74
VcanQ62059 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
VcanQ62059 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC10.43□□□□□ -0.74
VcanQ62059 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
VcanQ62059 Gm42467-201ENSMUST00000202954 1447 ntBASIC10.43□□□□□ -0.74
VcanQ62059 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
VcanQ62059 Fhl1-206ENSMUST00000116596 1203 ntTSL 5 BASIC10.43□□□□□ -0.74
VcanQ62059 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
VcanQ62059 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC10.43□□□□□ -0.74
VcanQ62059 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VcanQ62059 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
VcanQ62059 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
VcanQ62059 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
VcanQ62059 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
VcanQ62059 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
VcanQ62059 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
VcanQ62059 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
VcanQ62059 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
VcanQ62059 Mef2a-204ENSMUST00000107476 4759 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
VcanQ62059 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC10.42□□□□□ -0.74
VcanQ62059 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC10.42□□□□□ -0.74
VcanQ62059 Gm15727-201ENSMUST00000122416 437 ntBASIC10.42□□□□□ -0.74
VcanQ62059 Fam240a-201ENSMUST00000177678 499 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
VcanQ62059 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
VcanQ62059 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
VcanQ62059 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
VcanQ62059 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
VcanQ62059 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
VcanQ62059 Syna-201ENSMUST00000149604 2026 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
VcanQ62059 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
VcanQ62059 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
VcanQ62059 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
VcanQ62059 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
VcanQ62059 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
VcanQ62059 Mir7011-201ENSMUST00000183768 73 ntBASIC10.42□□□□□ -0.74
VcanQ62059 Mir8104-201ENSMUST00000185165 101 ntBASIC10.42□□□□□ -0.74
VcanQ62059 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
VcanQ62059 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.42□□□□□ -0.74
VcanQ62059 AC163646.3-202ENSMUST00000228685 691 ntBASIC10.42□□□□□ -0.74
VcanQ62059 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
VcanQ62059 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
VcanQ62059 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
VcanQ62059 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
VcanQ62059 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
VcanQ62059 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC10.42□□□□□ -0.74
VcanQ62059 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
VcanQ62059 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
VcanQ62059 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
VcanQ62059 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
VcanQ62059 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
VcanQ62059 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
VcanQ62059 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
VcanQ62059 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
VcanQ62059 Gm24597-201ENSMUST00000122503 300 ntBASIC10.42□□□□□ -0.74
VcanQ62059 1700030A11Rik-201ENSMUST00000125317 888 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
VcanQ62059 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC10.42□□□□□ -0.74
VcanQ62059 Crip1-205ENSMUST00000199089 509 ntTSL 3 BASIC10.42□□□□□ -0.74
VcanQ62059 Gm18119-201ENSMUST00000219972 616 ntBASIC10.42□□□□□ -0.74
VcanQ62059 Gm46376-201ENSMUST00000222653 654 ntTSL 3 BASIC10.42□□□□□ -0.74
VcanQ62059 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
VcanQ62059 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC10.42□□□□□ -0.74
VcanQ62059 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
VcanQ62059 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.41□□□□□ -0.74
VcanQ62059 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
VcanQ62059 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VcanQ62059 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VcanQ62059 Cd14-201ENSMUST00000061829 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VcanQ62059 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VcanQ62059 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.41□□□□□ -0.74
VcanQ62059 Pea15b-202ENSMUST00000183185 555 ntBASIC10.41□□□□□ -0.74
VcanQ62059 4933439N14Rik-201ENSMUST00000211062 1087 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
VcanQ62059 Gm39348-201ENSMUST00000216861 640 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
VcanQ62059 CR974487.1-201ENSMUST00000220984 413 ntBASIC10.41□□□□□ -0.74
VcanQ62059 AC163038.2-201ENSMUST00000224851 650 ntBASIC10.41□□□□□ -0.74
VcanQ62059 Gm24146-201ENSMUST00000082760 321 ntBASIC10.41□□□□□ -0.74
VcanQ62059 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
VcanQ62059 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.41□□□□□ -0.74
VcanQ62059 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
VcanQ62059 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VcanQ62059 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
VcanQ62059 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VcanQ62059 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VcanQ62059 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.41□□□□□ -0.74
VcanQ62059 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
VcanQ62059 Gm22900-201ENSMUST00000104538 130 ntBASIC10.41□□□□□ -0.74
VcanQ62059 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC10.41□□□□□ -0.74
VcanQ62059 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
VcanQ62059 Gm30301-201ENSMUST00000199474 652 ntTSL 5 BASIC10.41□□□□□ -0.74
VcanQ62059 Gm8170-201ENSMUST00000218581 945 ntBASIC10.41□□□□□ -0.74
VcanQ62059 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VcanQ62059 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
VcanQ62059 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VcanQ62059 Stard3nl-205ENSMUST00000197565 1391 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
VcanQ62059 AC154197.1-201ENSMUST00000225136 1382 ntBASIC10.41□□□□□ -0.74
VcanQ62059 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
VcanQ62059 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
VcanQ62059 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
VcanQ62059 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
VcanQ62059 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms