Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Ift88Q61371 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ift88Q61371 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ift88Q61371 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Ift88Q61371 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Ift88Q61371 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ift88Q61371 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.65□□□□□ -0.38
Ift88Q61371 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Ift88Q61371 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ift88Q61371 Gm45416-201ENSMUST00000209713 2201 ntBASIC12.65□□□□□ -0.38
Ift88Q61371 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ift88Q61371 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ift88Q61371 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Ift88Q61371 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Ift88Q61371 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ift88Q61371 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.65□□□□□ -0.38
Ift88Q61371 Gm13665-201ENSMUST00000120830 528 ntBASIC12.65□□□□□ -0.38
Ift88Q61371 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.65□□□□□ -0.38
Ift88Q61371 Gm20495-201ENSMUST00000173902 235 ntBASIC12.65□□□□□ -0.38
Ift88Q61371 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ift88Q61371 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.65□□□□□ -0.38
Ift88Q61371 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ift88Q61371 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ift88Q61371 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ift88Q61371 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.65□□□□□ -0.38
Ift88Q61371 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.65□□□□□ -0.38
Ift88Q61371 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.65□□□□□ -0.38
Ift88Q61371 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ift88Q61371 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.65□□□□□ -0.38
Ift88Q61371 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ift88Q61371 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ift88Q61371 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ift88Q61371 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ift88Q61371 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.65□□□□□ -0.38
Ift88Q61371 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ift88Q61371 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ift88Q61371 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ift88Q61371 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ift88Q61371 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Ift88Q61371 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Ift88Q61371 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ift88Q61371 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ift88Q61371 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift88Q61371 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift88Q61371 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift88Q61371 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift88Q61371 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Ift88Q61371 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift88Q61371 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift88Q61371 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ift88Q61371 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ift88Q61371 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift88Q61371 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift88Q61371 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ift88Q61371 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ift88Q61371 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift88Q61371 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ift88Q61371 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift88Q61371 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift88Q61371 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ift88Q61371 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ift88Q61371 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ift88Q61371 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift88Q61371 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ift88Q61371 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ift88Q61371 Gm14381-201ENSMUST00000122105 414 ntBASIC12.64□□□□□ -0.39
Ift88Q61371 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.64□□□□□ -0.39
Ift88Q61371 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.64□□□□□ -0.39
Ift88Q61371 Gm20482-202ENSMUST00000174729 825 ntBASIC12.64□□□□□ -0.39
Ift88Q61371 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ift88Q61371 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.64□□□□□ -0.39
Ift88Q61371 Gm38341-201ENSMUST00000195357 515 ntBASIC12.64□□□□□ -0.39
Ift88Q61371 Gm44967-201ENSMUST00000207047 631 ntBASIC12.64□□□□□ -0.39
Ift88Q61371 Gm45113-201ENSMUST00000207518 165 ntBASIC12.64□□□□□ -0.39
Ift88Q61371 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ift88Q61371 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.64□□□□□ -0.39
Ift88Q61371 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ift88Q61371 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ift88Q61371 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift88Q61371 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ift88Q61371 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift88Q61371 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift88Q61371 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift88Q61371 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ift88Q61371 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift88Q61371 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.64□□□□□ -0.39
Ift88Q61371 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift88Q61371 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ift88Q61371 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift88Q61371 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ift88Q61371 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift88Q61371 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift88Q61371 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC12.64□□□□□ -0.39
Ift88Q61371 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift88Q61371 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift88Q61371 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ift88Q61371 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ift88Q61371 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.63□□□□□ -0.39
Ift88Q61371 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ift88Q61371 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms