Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 Pfkm-201ENSMUST00000051226 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 Gm8805-201ENSMUST00000117848 313 ntBASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 Gm27331-201ENSMUST00000183705 60 ntBASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 Gm27486-201ENSMUST00000184923 80 ntBASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 AC166051.1-201ENSMUST00000214313 210 ntBASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 4933414I15Rik-201ENSMUST00000109123 2206 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 Gm7357-201ENSMUST00000195361 2991 ntBASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 Gm26511-201ENSMUST00000181400 1895 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 Cass4-201ENSMUST00000099061 3731 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 Gm38005-201ENSMUST00000194845 2745 ntBASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 Acmsd-201ENSMUST00000038006 2717 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Trav3-3Q5R1C3 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC8.59□□□□□ -1.04
Trav3-3Q5R1C3 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Gm19656-201ENSMUST00000208543 4610 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Gm26772-201ENSMUST00000180466 3429 ntTSL 5 BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Gm44775-201ENSMUST00000207266 1456 ntBASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Gm26541-201ENSMUST00000181866 3973 ntTSL 5 BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Tns1-201ENSMUST00000169786 9966 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Upp2-201ENSMUST00000059102 2498 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Gm26614-201ENSMUST00000180386 3909 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Cspg4-201ENSMUST00000035661 8121 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Rmrp-201ENSMUST00000157463 271 ntBASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Gm24196-201ENSMUST00000179161 110 ntBASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Gm8598-201ENSMUST00000221184 836 ntBASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 AL732506.1-201ENSMUST00000226420 281 ntBASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 AC158982.1-201ENSMUST00000228377 901 ntBASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Tal2-201ENSMUST00000030124 2971 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Gm45501-201ENSMUST00000211468 2526 ntBASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Inhbe-201ENSMUST00000059718 5319 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trav3-3Q5R1C3 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 92.6 ms