Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Syne3Q4FZC9 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Gm25732-201ENSMUST00000175168 60 ntBASIC12.18□□□□□ -0.46
Syne3Q4FZC9 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Gm28937-201ENSMUST00000185413 695 ntBASIC12.18□□□□□ -0.46
Syne3Q4FZC9 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Gm29400-201ENSMUST00000187208 695 ntBASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Gm28662-201ENSMUST00000188446 695 ntBASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Gm28251-201ENSMUST00000188835 695 ntBASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Gm5733-201ENSMUST00000190232 939 ntBASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Gm37318-201ENSMUST00000194325 695 ntBASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Gm38017-201ENSMUST00000194768 695 ntBASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Gm37287-201ENSMUST00000195449 695 ntBASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Gm37793-201ENSMUST00000195548 695 ntBASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Syne3Q4FZC9 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Syne3Q4FZC9 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Syne3Q4FZC9 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Gm11941-201ENSMUST00000119904 610 ntBASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Ntng1-201ENSMUST00000051253 327 ntBASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Syne3Q4FZC9 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.16□□□□□ -0.46
Syne3Q4FZC9 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Syne3Q4FZC9 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms