Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Cks1brtQ3UNC9 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Sipa1l2-201ENSMUST00000108775 6365 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 AC153380.1-201ENSMUST00000214959 2364 ntBASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Chd8-212ENSMUST00000200169 8509 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Padi1-201ENSMUST00000026378 3754 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Gm11964-201ENSMUST00000120982 444 ntBASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Gm5264-201ENSMUST00000190584 848 ntBASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Gm6439-201ENSMUST00000199849 862 ntBASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Gm17931-201ENSMUST00000208132 634 ntBASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Gm5781-201ENSMUST00000219792 443 ntBASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Gm18473-201ENSMUST00000220543 868 ntBASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 AC124732.2-201ENSMUST00000221977 316 ntBASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Gpatch2-202ENSMUST00000065573 4547 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Hivep2-205ENSMUST00000191138 9846 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Gm8752-201ENSMUST00000173427 1694 ntBASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Nup133-201ENSMUST00000044795 5808 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Dgcr2-204ENSMUST00000117945 4003 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Gm37233-201ENSMUST00000192173 6263 ntBASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Mtor-202ENSMUST00000103221 8564 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Brpf1-201ENSMUST00000113117 4540 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Gm15482-201ENSMUST00000152691 4529 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Nlrc5-204ENSMUST00000182409 4552 ntTSL 5 BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Nsd2-201ENSMUST00000058096 4633 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Eya3-213ENSMUST00000180250 5020 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Cks1brtQ3UNC9 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC8.16□□□□□ -1.1
Cks1brtQ3UNC9 Pdgfrb-202ENSMUST00000115274 5423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cks1brtQ3UNC9 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cks1brtQ3UNC9 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cks1brtQ3UNC9 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cks1brtQ3UNC9 Gm26614-201ENSMUST00000180386 3909 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cks1brtQ3UNC9 Adra1a-203ENSMUST00000159365 4118 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cks1brtQ3UNC9 Abr-204ENSMUST00000108407 4811 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cks1brtQ3UNC9 Daam1-205ENSMUST00000223272 5835 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cks1brtQ3UNC9 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC8.16□□□□□ -1.1
Cks1brtQ3UNC9 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cks1brtQ3UNC9 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cks1brtQ3UNC9 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cks1brtQ3UNC9 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cks1brtQ3UNC9 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cks1brtQ3UNC9 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
Cks1brtQ3UNC9 Gm15610-201ENSMUST00000120584 195 ntBASIC8.16□□□□□ -1.1
Cks1brtQ3UNC9 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cks1brtQ3UNC9 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cks1brtQ3UNC9 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cks1brtQ3UNC9 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Cks1brtQ3UNC9 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC8.16□□□□□ -1.1
Cks1brtQ3UNC9 Gm5706-201ENSMUST00000181525 993 ntBASIC8.16□□□□□ -1.1
Cks1brtQ3UNC9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Cks1brtQ3UNC9 Gm18798-201ENSMUST00000187264 1700 ntBASIC8.16□□□□□ -1.1
Cks1brtQ3UNC9 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC8.16□□□□□ -1.1
Cks1brtQ3UNC9 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cks1brtQ3UNC9 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Cks1brtQ3UNC9 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Cks1brtQ3UNC9 Ccdc47-201ENSMUST00000002043 5193 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms