Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Gm7790-201ENSMUST00000118716 1310 ntBASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Gm15599-201ENSMUST00000122283 1345 ntBASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Gm26931-201ENSMUST00000182273 609 ntBASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Olfr1329-201ENSMUST00000071979 942 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Spg11Q3UHA3 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 AC116596.1-201ENSMUST00000228112 1762 ntBASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Ighv13-1-201ENSMUST00000103480 294 ntBASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Gm37858-201ENSMUST00000192759 1231 ntBASIC10.51□□□□□ -0.73
Spg11Q3UHA3 AC102327.1-201ENSMUST00000226389 742 ntBASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Matn2-206ENSMUST00000228570 2798 ntBASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Spg11Q3UHA3 Gm25288-201ENSMUST00000122800 265 ntBASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Gm16301-201ENSMUST00000161959 295 ntBASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Gm20467-201ENSMUST00000172872 994 ntTSL 3 BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Gm28809-201ENSMUST00000187542 782 ntTSL 5 BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Gm44460-201ENSMUST00000196179 129 ntBASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Polr2k-201ENSMUST00000057177 601 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Gm7061-201ENSMUST00000118127 1416 ntBASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Gm14071-201ENSMUST00000117817 509 ntBASIC10.5□□□□□ -0.73
Spg11Q3UHA3 n-R5s154-201ENSMUST00000122513 108 ntBASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Gm15258-201ENSMUST00000153801 741 ntBASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Gm9619-201ENSMUST00000211587 762 ntBASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC10.5□□□□□ -0.73
Spg11Q3UHA3 Gm10238-201ENSMUST00000089689 408 ntBASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms