Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-2P97503 n-R5s64-201ENSMUST00000102019 119 ntBASIC10.89□□□□□ -0.67
Nkx3-2P97503 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Gm14665-201ENSMUST00000122294 557 ntBASIC10.89□□□□□ -0.67
Nkx3-2P97503 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-2P97503 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Gm22138-201ENSMUST00000158748 128 ntBASIC10.89□□□□□ -0.67
Nkx3-2P97503 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-2P97503 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Gm38151-201ENSMUST00000195085 289 ntBASIC10.89□□□□□ -0.67
Nkx3-2P97503 Gm43852-201ENSMUST00000202098 917 ntBASIC10.89□□□□□ -0.67
Nkx3-2P97503 Gm44421-201ENSMUST00000205064 1221 ntBASIC10.89□□□□□ -0.67
Nkx3-2P97503 Gm45113-201ENSMUST00000207518 165 ntBASIC10.89□□□□□ -0.67
Nkx3-2P97503 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC10.89□□□□□ -0.67
Nkx3-2P97503 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC10.89□□□□□ -0.67
Nkx3-2P97503 AC115122.1-201ENSMUST00000224850 1040 ntBASIC10.89□□□□□ -0.67
Nkx3-2P97503 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.89□□□□□ -0.67
Nkx3-2P97503 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.89□□□□□ -0.67
Nkx3-2P97503 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx3-2P97503 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.88□□□□□ -0.67
Nkx3-2P97503 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Gm11949-201ENSMUST00000117640 372 ntBASIC10.88□□□□□ -0.67
Nkx3-2P97503 Gm11246-201ENSMUST00000120880 345 ntBASIC10.88□□□□□ -0.67
Nkx3-2P97503 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Gm4654-201ENSMUST00000183305 982 ntBASIC10.88□□□□□ -0.67
Nkx3-2P97503 Mir8115-201ENSMUST00000184992 119 ntBASIC10.88□□□□□ -0.67
Nkx3-2P97503 Mir8093-201ENSMUST00000185043 137 ntBASIC10.88□□□□□ -0.67
Nkx3-2P97503 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Gm5542-201ENSMUST00000195485 1089 ntBASIC10.88□□□□□ -0.67
Nkx3-2P97503 Gm43186-201ENSMUST00000198130 824 ntBASIC10.88□□□□□ -0.67
Nkx3-2P97503 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.88□□□□□ -0.67
Nkx3-2P97503 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.88□□□□□ -0.67
Nkx3-2P97503 AC153505.1-201ENSMUST00000218819 1071 ntBASIC10.88□□□□□ -0.67
Nkx3-2P97503 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-2P97503 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.88□□□□□ -0.67
Nkx3-2P97503 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Snora73b-201ENSMUST00000083419 205 ntBASIC10.88□□□□□ -0.67
Nkx3-2P97503 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-2P97503 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms