Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC9.61□□□□□ -0.87
Npas1P97459 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Npas1P97459 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Npas1P97459 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Npas1P97459 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Npas1P97459 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Npas1P97459 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Npas1P97459 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Npas1P97459 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC9.61□□□□□ -0.87
Npas1P97459 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Npas1P97459 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC9.61□□□□□ -0.87
Npas1P97459 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Npas1P97459 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Npas1P97459 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Npas1P97459 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Npas1P97459 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Npas1P97459 Gm12058-201ENSMUST00000118614 437 ntBASIC9.61□□□□□ -0.87
Npas1P97459 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Npas1P97459 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC9.61□□□□□ -0.87
Npas1P97459 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC9.61□□□□□ -0.87
Npas1P97459 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC9.61□□□□□ -0.87
Npas1P97459 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Npas1P97459 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC9.61□□□□□ -0.87
Npas1P97459 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
Npas1P97459 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC9.61□□□□□ -0.87
Npas1P97459 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Npas1P97459 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC9.61□□□□□ -0.87
Npas1P97459 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC9.61□□□□□ -0.87
Npas1P97459 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC9.61□□□□□ -0.87
Npas1P97459 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Npas1P97459 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Npas1P97459 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Npas1P97459 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Npas1P97459 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Npas1P97459 AC165148.1-201ENSMUST00000224795 2372 ntBASIC9.61□□□□□ -0.87
Npas1P97459 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Npas1P97459 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Npas1P97459 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC9.61□□□□□ -0.87
Npas1P97459 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Npas1P97459 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Npas1P97459 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Npas1P97459 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Npas1P97459 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Npas1P97459 Klhl22-202ENSMUST00000120488 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Npas1P97459 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Npas1P97459 Rasal1-205ENSMUST00000156722 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Npas1P97459 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Npas1P97459 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Npas1P97459 Gm37737-201ENSMUST00000195013 1638 ntBASIC9.6□□□□□ -0.87
Npas1P97459 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Npas1P97459 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
Npas1P97459 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Npas1P97459 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Npas1P97459 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Npas1P97459 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Npas1P97459 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Npas1P97459 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Npas1P97459 Gm18626-201ENSMUST00000221512 1409 ntBASIC9.6□□□□□ -0.87
Npas1P97459 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Npas1P97459 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Npas1P97459 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Npas1P97459 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Npas1P97459 Gm12390-201ENSMUST00000117897 397 ntBASIC9.6□□□□□ -0.87
Npas1P97459 Gm8908-201ENSMUST00000121633 1024 ntBASIC9.6□□□□□ -0.87
Npas1P97459 Gm12164-201ENSMUST00000121695 551 ntBASIC9.6□□□□□ -0.87
Npas1P97459 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC9.6□□□□□ -0.87
Npas1P97459 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Npas1P97459 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC9.6□□□□□ -0.87
Npas1P97459 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC9.6□□□□□ -0.87
Npas1P97459 Gm24845-201ENSMUST00000158034 109 ntBASIC9.6□□□□□ -0.87
Npas1P97459 Gm24548-201ENSMUST00000158650 108 ntBASIC9.6□□□□□ -0.87
Npas1P97459 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Npas1P97459 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC9.6□□□□□ -0.87
Npas1P97459 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Npas1P97459 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Npas1P97459 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Npas1P97459 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Npas1P97459 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Npas1P97459 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC9.6□□□□□ -0.87
Npas1P97459 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Npas1P97459 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC9.6□□□□□ -0.87
Npas1P97459 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC9.6□□□□□ -0.87
Npas1P97459 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Npas1P97459 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Npas1P97459 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC9.6□□□□□ -0.87
Npas1P97459 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Npas1P97459 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Npas1P97459 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC9.6□□□□□ -0.87
Npas1P97459 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Npas1P97459 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Npas1P97459 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Npas1P97459 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Npas1P97459 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC9.6□□□□□ -0.87
Npas1P97459 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Npas1P97459 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Npas1P97459 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Npas1P97459 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Npas1P97459 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC9.6□□□□□ -0.87
Npas1P97459 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Npas1P97459 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms