Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lig3P97386 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Lig3P97386 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Lig3P97386 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.61□□□□□ -0.39
Lig3P97386 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.61□□□□□ -0.39
Lig3P97386 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.61□□□□□ -0.39
Lig3P97386 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.61□□□□□ -0.39
Lig3P97386 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC12.61□□□□□ -0.39
Lig3P97386 Gm27530-201ENSMUST00000184096 98 ntBASIC12.61□□□□□ -0.39
Lig3P97386 Gm5621-201ENSMUST00000187303 640 ntBASIC12.61□□□□□ -0.39
Lig3P97386 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC12.61□□□□□ -0.39
Lig3P97386 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Lig3P97386 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lig3P97386 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lig3P97386 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.61□□□□□ -0.39
Lig3P97386 Gm4157-201ENSMUST00000211647 679 ntBASIC12.61□□□□□ -0.39
Lig3P97386 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lig3P97386 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lig3P97386 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Lig3P97386 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lig3P97386 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lig3P97386 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.61□□□□□ -0.39
Lig3P97386 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lig3P97386 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lig3P97386 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lig3P97386 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lig3P97386 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.61□□□□□ -0.39
Lig3P97386 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lig3P97386 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lig3P97386 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.61□□□□□ -0.39
Lig3P97386 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lig3P97386 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lig3P97386 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.61□□□□□ -0.39
Lig3P97386 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lig3P97386 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Lig3P97386 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lig3P97386 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lig3P97386 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lig3P97386 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lig3P97386 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lig3P97386 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lig3P97386 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lig3P97386 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Lig3P97386 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Lig3P97386 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.6□□□□□ -0.39
Lig3P97386 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lig3P97386 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Lig3P97386 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lig3P97386 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lig3P97386 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Lig3P97386 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lig3P97386 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lig3P97386 Gm12857-201ENSMUST00000117678 592 ntBASIC12.6□□□□□ -0.39
Lig3P97386 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.6□□□□□ -0.39
Lig3P97386 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lig3P97386 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Lig3P97386 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC12.6□□□□□ -0.39
Lig3P97386 Mir1956-201ENSMUST00000157748 65 ntBASIC12.6□□□□□ -0.39
Lig3P97386 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lig3P97386 Gm37299-201ENSMUST00000193951 826 ntBASIC12.6□□□□□ -0.39
Lig3P97386 Gm42599-201ENSMUST00000201308 469 ntBASIC12.6□□□□□ -0.39
Lig3P97386 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lig3P97386 Gm44980-201ENSMUST00000205826 314 ntBASIC12.6□□□□□ -0.39
Lig3P97386 Gm45120-201ENSMUST00000208880 408 ntBASIC12.6□□□□□ -0.39
Lig3P97386 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.6□□□□□ -0.39
Lig3P97386 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.6□□□□□ -0.39
Lig3P97386 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lig3P97386 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lig3P97386 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lig3P97386 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lig3P97386 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Lig3P97386 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.6□□□□□ -0.39
Lig3P97386 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Lig3P97386 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lig3P97386 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lig3P97386 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Lig3P97386 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lig3P97386 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.6□□□□□ -0.39
Lig3P97386 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lig3P97386 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lig3P97386 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lig3P97386 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lig3P97386 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lig3P97386 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lig3P97386 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC12.6□□□□□ -0.39
Lig3P97386 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lig3P97386 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lig3P97386 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lig3P97386 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lig3P97386 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lig3P97386 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lig3P97386 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Lig3P97386 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lig3P97386 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lig3P97386 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lig3P97386 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.59□□□□□ -0.39
Lig3P97386 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lig3P97386 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lig3P97386 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lig3P97386 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms