Protein–RNA interactions for Protein: P84444

Ccl21a, C-C motif chemokine 21a, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl21aP84444 Gm11960-201ENSMUST00000122068 925 ntBASIC9.53□□□□□ -0.88
Ccl21aP84444 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Ccl21aP84444 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC9.53□□□□□ -0.88
Ccl21aP84444 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC9.53□□□□□ -0.88
Ccl21aP84444 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Ccl21aP84444 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ccl21aP84444 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Ccl21aP84444 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC9.53□□□□□ -0.88
Ccl21aP84444 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
Ccl21aP84444 Gm17936-201ENSMUST00000199413 988 ntBASIC9.53□□□□□ -0.88
Ccl21aP84444 Gm43866-201ENSMUST00000203894 839 ntBASIC9.53□□□□□ -0.88
Ccl21aP84444 AC158986.2-201ENSMUST00000227487 618 ntBASIC9.53□□□□□ -0.88
Ccl21aP84444 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Ccl21aP84444 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ccl21aP84444 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ccl21aP84444 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Ccl21aP84444 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC9.53□□□□□ -0.88
Ccl21aP84444 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Ccl21aP84444 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC9.53□□□□□ -0.88
Ccl21aP84444 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Ccl21aP84444 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Ccl21aP84444 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Ccl21aP84444 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC9.53□□□□□ -0.88
Ccl21aP84444 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ccl21aP84444 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Ccl21aP84444 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Ccl21aP84444 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Ccl21aP84444 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ccl21aP84444 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Ccl21aP84444 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC9.52□□□□□ -0.88
Ccl21aP84444 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Ccl21aP84444 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
Ccl21aP84444 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Ccl21aP84444 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Ccl21aP84444 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Ccl21aP84444 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Ccl21aP84444 Gm9915-201ENSMUST00000066196 1383 ntBASIC9.52□□□□□ -0.88
Ccl21aP84444 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
Ccl21aP84444 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Ccl21aP84444 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Ccl21aP84444 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl21aP84444 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl21aP84444 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl21aP84444 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl21aP84444 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl21aP84444 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl21aP84444 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl21aP84444 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl21aP84444 Gm23439-201ENSMUST00000104292 132 ntBASIC9.52□□□□□ -0.89
Ccl21aP84444 Gm25148-201ENSMUST00000104611 123 ntBASIC9.52□□□□□ -0.89
Ccl21aP84444 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl21aP84444 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC9.52□□□□□ -0.89
Ccl21aP84444 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl21aP84444 Gm15746-201ENSMUST00000120684 1027 ntBASIC9.52□□□□□ -0.89
Ccl21aP84444 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl21aP84444 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC9.52□□□□□ -0.89
Ccl21aP84444 Gm16547-201ENSMUST00000159474 293 ntBASIC9.52□□□□□ -0.89
Ccl21aP84444 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl21aP84444 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl21aP84444 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC9.52□□□□□ -0.89
Ccl21aP84444 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC9.52□□□□□ -0.89
Ccl21aP84444 Ighv5-8-202ENSMUST00000191967 337 ntBASIC9.52□□□□□ -0.89
Ccl21aP84444 Gm19918-201ENSMUST00000194858 400 ntBASIC9.52□□□□□ -0.89
Ccl21aP84444 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC9.52□□□□□ -0.89
Ccl21aP84444 Gm43811-201ENSMUST00000202862 695 ntBASIC9.52□□□□□ -0.89
Ccl21aP84444 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC9.52□□□□□ -0.89
Ccl21aP84444 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC9.52□□□□□ -0.89
Ccl21aP84444 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC9.52□□□□□ -0.89
Ccl21aP84444 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC9.52□□□□□ -0.89
Ccl21aP84444 AC134601.2-201ENSMUST00000221071 130 ntBASIC9.52□□□□□ -0.89
Ccl21aP84444 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl21aP84444 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl21aP84444 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl21aP84444 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl21aP84444 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl21aP84444 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl21aP84444 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Ccl21aP84444 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl21aP84444 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC9.52□□□□□ -0.89
Ccl21aP84444 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl21aP84444 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl21aP84444 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl21aP84444 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl21aP84444 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl21aP84444 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Ccl21aP84444 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl21aP84444 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Ccl21aP84444 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl21aP84444 Matn2-206ENSMUST00000228570 2798 ntBASIC9.52□□□□□ -0.89
Ccl21aP84444 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Ccl21aP84444 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl21aP84444 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Ccl21aP84444 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Ccl21aP84444 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC9.51□□□□□ -0.89
Ccl21aP84444 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Ccl21aP84444 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl21aP84444 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl21aP84444 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Ccl21aP84444 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Ccl21aP84444 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms