Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Sec61a1P61620 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.12□□□□□ -0.79
Sec61a1P61620 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.12□□□□□ -0.79
Sec61a1P61620 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.12□□□□□ -0.79
Sec61a1P61620 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 Gm24749-201ENSMUST00000157838 343 ntBASIC10.12□□□□□ -0.79
Sec61a1P61620 Rn7s1-201ENSMUST00000174924 300 ntBASIC10.12□□□□□ -0.79
Sec61a1P61620 Rn7s2-201ENSMUST00000175032 300 ntBASIC10.12□□□□□ -0.79
Sec61a1P61620 Gm26461-201ENSMUST00000175064 290 ntBASIC10.12□□□□□ -0.79
Sec61a1P61620 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 Gm9230-201ENSMUST00000188228 532 ntBASIC10.12□□□□□ -0.79
Sec61a1P61620 Gm7003-201ENSMUST00000195089 312 ntBASIC10.12□□□□□ -0.79
Sec61a1P61620 Gm17812-201ENSMUST00000204935 318 ntBASIC10.12□□□□□ -0.79
Sec61a1P61620 Gm45433-201ENSMUST00000209386 247 ntBASIC10.12□□□□□ -0.79
Sec61a1P61620 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.12□□□□□ -0.79
Sec61a1P61620 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.12□□□□□ -0.79
Sec61a1P61620 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Sec61a1P61620 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Sec61a1P61620 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 CU062626.3-201ENSMUST00000225522 1411 ntBASIC10.12□□□□□ -0.79
Sec61a1P61620 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Sec61a1P61620 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Sec61a1P61620 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.12□□□□□ -0.79
Sec61a1P61620 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Sec61a1P61620 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC10.12□□□□□ -0.79
Sec61a1P61620 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sec61a1P61620 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sec61a1P61620 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Sec61a1P61620 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sec61a1P61620 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.11□□□□□ -0.79
Sec61a1P61620 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sec61a1P61620 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Sec61a1P61620 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Sec61a1P61620 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.11□□□□□ -0.79
Sec61a1P61620 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Sec61a1P61620 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sec61a1P61620 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sec61a1P61620 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sec61a1P61620 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sec61a1P61620 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Sec61a1P61620 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sec61a1P61620 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sec61a1P61620 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sec61a1P61620 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sec61a1P61620 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC10.11□□□□□ -0.79
Sec61a1P61620 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Sec61a1P61620 Gm11989-201ENSMUST00000117240 672 ntBASIC10.11□□□□□ -0.79
Sec61a1P61620 Gm11362-201ENSMUST00000118838 850 ntBASIC10.11□□□□□ -0.79
Sec61a1P61620 Gm12217-201ENSMUST00000118858 696 ntBASIC10.11□□□□□ -0.79
Sec61a1P61620 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sec61a1P61620 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
Sec61a1P61620 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.11□□□□□ -0.79
Sec61a1P61620 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Sec61a1P61620 Gm28450-201ENSMUST00000187349 638 ntBASIC10.11□□□□□ -0.79
Sec61a1P61620 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Sec61a1P61620 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.11□□□□□ -0.79
Sec61a1P61620 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.11□□□□□ -0.79
Sec61a1P61620 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sec61a1P61620 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Sec61a1P61620 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sec61a1P61620 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.11□□□□□ -0.79
Sec61a1P61620 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Sec61a1P61620 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Sec61a1P61620 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.11□□□□□ -0.79
Sec61a1P61620 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sec61a1P61620 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Sec61a1P61620 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Sec61a1P61620 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms