Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nup43P59235 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Nup43P59235 Gm21998-201ENSMUST00000117552 1308 ntBASIC10.84□□□□□ -0.67
Nup43P59235 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC10.84□□□□□ -0.67
Nup43P59235 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.84□□□□□ -0.67
Nup43P59235 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.83□□□□□ -0.67
Nup43P59235 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.67
Nup43P59235 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Nup43P59235 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup43P59235 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup43P59235 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.83□□□□□ -0.68
Nup43P59235 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nup43P59235 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup43P59235 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nup43P59235 Rubie-203ENSMUST00000227803 2430 ntBASIC10.83□□□□□ -0.68
Nup43P59235 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup43P59235 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Nup43P59235 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup43P59235 Gm11836-201ENSMUST00000121022 441 ntBASIC10.83□□□□□ -0.68
Nup43P59235 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Nup43P59235 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.83□□□□□ -0.68
Nup43P59235 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.83□□□□□ -0.68
Nup43P59235 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC10.83□□□□□ -0.68
Nup43P59235 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup43P59235 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.83□□□□□ -0.68
Nup43P59235 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.83□□□□□ -0.68
Nup43P59235 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nup43P59235 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nup43P59235 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup43P59235 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Nup43P59235 Gm18393-201ENSMUST00000208349 1131 ntBASIC10.83□□□□□ -0.68
Nup43P59235 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.83□□□□□ -0.68
Nup43P59235 Gm6722-201ENSMUST00000221586 390 ntBASIC10.83□□□□□ -0.68
Nup43P59235 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.83□□□□□ -0.68
Nup43P59235 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Nup43P59235 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Nup43P59235 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Nup43P59235 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup43P59235 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup43P59235 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nup43P59235 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.83□□□□□ -0.68
Nup43P59235 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nup43P59235 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.83□□□□□ -0.68
Nup43P59235 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup43P59235 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nup43P59235 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nup43P59235 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nup43P59235 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.82□□□□□ -0.68
Nup43P59235 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup43P59235 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup43P59235 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup43P59235 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup43P59235 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup43P59235 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup43P59235 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup43P59235 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Nup43P59235 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup43P59235 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup43P59235 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup43P59235 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nup43P59235 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Nup43P59235 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.82□□□□□ -0.68
Nup43P59235 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.82□□□□□ -0.68
Nup43P59235 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC10.82□□□□□ -0.68
Nup43P59235 Gm15725-201ENSMUST00000119947 1090 ntBASIC10.82□□□□□ -0.68
Nup43P59235 Gm9089-201ENSMUST00000122027 526 ntBASIC10.82□□□□□ -0.68
Nup43P59235 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.82□□□□□ -0.68
Nup43P59235 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nup43P59235 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nup43P59235 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nup43P59235 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nup43P59235 Gm4654-201ENSMUST00000183305 982 ntBASIC10.82□□□□□ -0.68
Nup43P59235 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC10.82□□□□□ -0.68
Nup43P59235 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC10.82□□□□□ -0.68
Nup43P59235 Gm37981-201ENSMUST00000194280 535 ntBASIC10.82□□□□□ -0.68
Nup43P59235 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nup43P59235 Gm17831-201ENSMUST00000205579 900 ntBASIC10.82□□□□□ -0.68
Nup43P59235 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.82□□□□□ -0.68
Nup43P59235 Gm10254-201ENSMUST00000052888 867 ntBASIC10.82□□□□□ -0.68
Nup43P59235 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Nup43P59235 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup43P59235 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup43P59235 Olfr584-201ENSMUST00000098210 964 ntBASIC10.82□□□□□ -0.68
Nup43P59235 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup43P59235 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.82□□□□□ -0.68
Nup43P59235 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup43P59235 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nup43P59235 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup43P59235 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup43P59235 AC166836.1-201ENSMUST00000219933 1795 ntBASIC10.82□□□□□ -0.68
Nup43P59235 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nup43P59235 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.82□□□□□ -0.68
Nup43P59235 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup43P59235 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.82□□□□□ -0.68
Nup43P59235 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup43P59235 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup43P59235 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup43P59235 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup43P59235 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nup43P59235 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms