Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NcanP55066 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
NcanP55066 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NcanP55066 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NcanP55066 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
NcanP55066 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NcanP55066 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NcanP55066 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NcanP55066 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
NcanP55066 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
NcanP55066 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
NcanP55066 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NcanP55066 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.06□□□□□ -0.48
NcanP55066 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NcanP55066 Gm12745-201ENSMUST00000121767 214 ntBASIC12.06□□□□□ -0.48
NcanP55066 Gm12499-201ENSMUST00000121961 546 ntBASIC12.06□□□□□ -0.48
NcanP55066 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NcanP55066 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC12.06□□□□□ -0.48
NcanP55066 AC241616.1-201ENSMUST00000213741 166 ntBASIC12.06□□□□□ -0.48
NcanP55066 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC12.06□□□□□ -0.48
NcanP55066 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC12.06□□□□□ -0.48
NcanP55066 AC122024.3-201ENSMUST00000217719 294 ntBASIC12.06□□□□□ -0.48
NcanP55066 Gm5194-201ENSMUST00000221457 742 ntBASIC12.06□□□□□ -0.48
NcanP55066 AC134913.2-201ENSMUST00000225017 771 ntBASIC12.06□□□□□ -0.48
NcanP55066 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NcanP55066 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NcanP55066 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NcanP55066 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NcanP55066 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
NcanP55066 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
NcanP55066 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NcanP55066 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.06□□□□□ -0.48
NcanP55066 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.06□□□□□ -0.48
NcanP55066 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC12.06□□□□□ -0.48
NcanP55066 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NcanP55066 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NcanP55066 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.06□□□□□ -0.48
NcanP55066 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
NcanP55066 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NcanP55066 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NcanP55066 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
NcanP55066 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NcanP55066 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC12.06□□□□□ -0.48
NcanP55066 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NcanP55066 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NcanP55066 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NcanP55066 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
NcanP55066 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NcanP55066 Gm9244-201ENSMUST00000056767 2129 ntBASIC12.05□□□□□ -0.48
NcanP55066 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.05□□□□□ -0.48
NcanP55066 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NcanP55066 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
NcanP55066 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NcanP55066 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NcanP55066 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NcanP55066 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NcanP55066 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC12.05□□□□□ -0.48
NcanP55066 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.05□□□□□ -0.48
NcanP55066 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
NcanP55066 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NcanP55066 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NcanP55066 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NcanP55066 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
NcanP55066 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC12.05□□□□□ -0.48
NcanP55066 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC12.05□□□□□ -0.48
NcanP55066 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC12.05□□□□□ -0.48
NcanP55066 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC12.05□□□□□ -0.48
NcanP55066 H2afy3-201ENSMUST00000151919 1112 ntBASIC12.05□□□□□ -0.48
NcanP55066 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
NcanP55066 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
NcanP55066 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
NcanP55066 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
NcanP55066 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
NcanP55066 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NcanP55066 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
NcanP55066 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NcanP55066 Gm43564-201ENSMUST00000196185 211 ntBASIC12.05□□□□□ -0.48
NcanP55066 AC124356.1-201ENSMUST00000221469 698 ntBASIC12.05□□□□□ -0.48
NcanP55066 AC154435.1-201ENSMUST00000223938 959 ntBASIC12.05□□□□□ -0.48
NcanP55066 AC163646.3-201ENSMUST00000228879 772 ntBASIC12.05□□□□□ -0.48
NcanP55066 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
NcanP55066 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NcanP55066 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
NcanP55066 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NcanP55066 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NcanP55066 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NcanP55066 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NcanP55066 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NcanP55066 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NcanP55066 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NcanP55066 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NcanP55066 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.05□□□□□ -0.48
NcanP55066 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NcanP55066 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NcanP55066 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC12.05□□□□□ -0.48
NcanP55066 Gm9915-201ENSMUST00000066196 1383 ntBASIC12.05□□□□□ -0.48
NcanP55066 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
NcanP55066 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NcanP55066 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NcanP55066 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms