Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atxn1P54254 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atxn1P54254 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Atxn1P54254 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atxn1P54254 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.44□□□□□ -0.58
Atxn1P54254 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Atxn1P54254 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Atxn1P54254 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC11.44□□□□□ -0.58
Atxn1P54254 Gm11942-201ENSMUST00000180255 345 ntBASIC11.44□□□□□ -0.58
Atxn1P54254 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Atxn1P54254 Gm7904-201ENSMUST00000217049 465 ntBASIC11.44□□□□□ -0.58
Atxn1P54254 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atxn1P54254 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atxn1P54254 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Atxn1P54254 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atxn1P54254 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Atxn1P54254 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Atxn1P54254 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Atxn1P54254 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Atxn1P54254 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atxn1P54254 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Atxn1P54254 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Atxn1P54254 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atxn1P54254 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Atxn1P54254 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atxn1P54254 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Atxn1P54254 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Atxn1P54254 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.44□□□□□ -0.58
Atxn1P54254 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.44□□□□□ -0.58
Atxn1P54254 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atxn1P54254 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.44□□□□□ -0.58
Atxn1P54254 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atxn1P54254 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.43□□□□□ -0.58
Atxn1P54254 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Atxn1P54254 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atxn1P54254 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Atxn1P54254 Gm38344-201ENSMUST00000195306 1353 ntBASIC11.43□□□□□ -0.58
Atxn1P54254 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.43□□□□□ -0.58
Atxn1P54254 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Atxn1P54254 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atxn1P54254 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.43□□□□□ -0.58
Atxn1P54254 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atxn1P54254 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atxn1P54254 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Atxn1P54254 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Atxn1P54254 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.43□□□□□ -0.58
Atxn1P54254 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Atxn1P54254 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Atxn1P54254 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.43□□□□□ -0.58
Atxn1P54254 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.43□□□□□ -0.58
Atxn1P54254 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.43□□□□□ -0.58
Atxn1P54254 Gm15004-201ENSMUST00000119192 630 ntBASIC11.43□□□□□ -0.58
Atxn1P54254 Gm12337-201ENSMUST00000119634 400 ntBASIC11.43□□□□□ -0.58
Atxn1P54254 Gm9166-201ENSMUST00000120293 561 ntBASIC11.43□□□□□ -0.58
Atxn1P54254 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC11.43□□□□□ -0.58
Atxn1P54254 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC11.43□□□□□ -0.58
Atxn1P54254 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Atxn1P54254 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Atxn1P54254 Gm25677-201ENSMUST00000174983 72 ntBASIC11.43□□□□□ -0.58
Atxn1P54254 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Atxn1P54254 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC11.43□□□□□ -0.58
Atxn1P54254 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Atxn1P54254 Gm18561-201ENSMUST00000206027 804 ntBASIC11.43□□□□□ -0.58
Atxn1P54254 AC164087.2-201ENSMUST00000216206 1072 ntBASIC11.43□□□□□ -0.58
Atxn1P54254 AC134537.1-201ENSMUST00000219205 265 ntBASIC11.43□□□□□ -0.58
Atxn1P54254 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atxn1P54254 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atxn1P54254 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC11.43□□□□□ -0.58
Atxn1P54254 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atxn1P54254 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atxn1P54254 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atxn1P54254 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Atxn1P54254 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atxn1P54254 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atxn1P54254 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atxn1P54254 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atxn1P54254 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Atxn1P54254 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atxn1P54254 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC11.43□□□□□ -0.58
Atxn1P54254 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atxn1P54254 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Atxn1P54254 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Atxn1P54254 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atxn1P54254 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atxn1P54254 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.43□□□□□ -0.58
Atxn1P54254 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atxn1P54254 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atxn1P54254 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.42□□□□□ -0.58
Atxn1P54254 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.42□□□□□ -0.58
Atxn1P54254 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atxn1P54254 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atxn1P54254 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atxn1P54254 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atxn1P54254 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Atxn1P54254 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.42□□□□□ -0.58
Atxn1P54254 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atxn1P54254 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Atxn1P54254 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Atxn1P54254 Gm15620-201ENSMUST00000122949 270 ntBASIC11.42□□□□□ -0.58
Atxn1P54254 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms