Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Mir6934-201ENSMUST00000183965 62 ntBASIC11.75□□□□□ -0.53
Sox1P53783 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Sox1P53783 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox1P53783 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC11.75□□□□□ -0.53
Sox1P53783 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC11.75□□□□□ -0.53
Sox1P53783 Gm9102-201ENSMUST00000219250 465 ntBASIC11.75□□□□□ -0.53
Sox1P53783 AC129017.2-201ENSMUST00000226118 1284 ntBASIC11.75□□□□□ -0.53
Sox1P53783 AC107711.4-201ENSMUST00000228948 440 ntBASIC11.75□□□□□ -0.53
Sox1P53783 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox1P53783 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox1P53783 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox1P53783 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox1P53783 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox1P53783 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox1P53783 Gm7405-201ENSMUST00000121476 1337 ntBASIC11.75□□□□□ -0.53
Sox1P53783 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox1P53783 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.75□□□□□ -0.53
Sox1P53783 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox1P53783 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox1P53783 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox1P53783 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.75□□□□□ -0.53
Sox1P53783 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox1P53783 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Sox1P53783 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox1P53783 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox1P53783 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.74□□□□□ -0.53
Sox1P53783 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sox1P53783 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.74□□□□□ -0.53
Sox1P53783 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox1P53783 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox1P53783 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sox1P53783 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox1P53783 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox1P53783 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox1P53783 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox1P53783 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox1P53783 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.74□□□□□ -0.53
Sox1P53783 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Sox1P53783 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Sox1P53783 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Sox1P53783 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox1P53783 Gm15636-201ENSMUST00000119205 668 ntBASIC11.74□□□□□ -0.53
Sox1P53783 Gm13505-201ENSMUST00000121666 817 ntBASIC11.74□□□□□ -0.53
Sox1P53783 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC11.74□□□□□ -0.53
Sox1P53783 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox1P53783 Gm5808-201ENSMUST00000178090 357 ntBASIC11.74□□□□□ -0.53
Sox1P53783 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC11.74□□□□□ -0.53
Sox1P53783 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC11.74□□□□□ -0.53
Sox1P53783 Gm42687-201ENSMUST00000199075 164 ntBASIC11.74□□□□□ -0.53
Sox1P53783 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC11.74□□□□□ -0.53
Sox1P53783 Gm5040-201ENSMUST00000218609 800 ntBASIC11.74□□□□□ -0.53
Sox1P53783 AC124356.1-201ENSMUST00000221469 698 ntBASIC11.74□□□□□ -0.53
Sox1P53783 CT025618.1-201ENSMUST00000227409 1279 ntBASIC11.74□□□□□ -0.53
Sox1P53783 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox1P53783 Gm5278-201ENSMUST00000055957 552 ntBASIC11.74□□□□□ -0.53
Sox1P53783 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox1P53783 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox1P53783 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox1P53783 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox1P53783 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox1P53783 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sox1P53783 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox1P53783 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.74□□□□□ -0.53
Sox1P53783 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox1P53783 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox1P53783 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox1P53783 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sox1P53783 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox1P53783 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.74□□□□□ -0.53
Sox1P53783 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox1P53783 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sox1P53783 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sox1P53783 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox1P53783 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Sox1P53783 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox1P53783 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox1P53783 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox1P53783 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox1P53783 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC11.73□□□□□ -0.53
Sox1P53783 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sox1P53783 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Sox1P53783 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC11.73□□□□□ -0.53
Sox1P53783 Snord23-201ENSMUST00000116828 109 ntBASIC11.73□□□□□ -0.53
Sox1P53783 Gm14227-201ENSMUST00000119431 629 ntBASIC11.73□□□□□ -0.53
Sox1P53783 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.73□□□□□ -0.53
Sox1P53783 Gm13608-201ENSMUST00000121807 1406 ntBASIC11.73□□□□□ -0.53
Sox1P53783 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sox1P53783 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC11.73□□□□□ -0.53
Sox1P53783 Gm7805-201ENSMUST00000154348 448 ntBASIC11.73□□□□□ -0.53
Sox1P53783 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Sox1P53783 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.73□□□□□ -0.53
Sox1P53783 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.73□□□□□ -0.53
Sox1P53783 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC11.73□□□□□ -0.53
Sox1P53783 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sox1P53783 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sox1P53783 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC11.73□□□□□ -0.53
Sox1P53783 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.73□□□□□ -0.53
Sox1P53783 Gm38135-201ENSMUST00000195068 502 ntBASIC11.73□□□□□ -0.53
Sox1P53783 Gm40332-201ENSMUST00000199847 938 ntBASIC11.73□□□□□ -0.53
Sox1P53783 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms