Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pdx1P52946 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Pdx1P52946 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdx1P52946 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.32□□□□□ -0.6
Pdx1P52946 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Pdx1P52946 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Pdx1P52946 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.32□□□□□ -0.6
Pdx1P52946 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdx1P52946 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pdx1P52946 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pdx1P52946 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Pdx1P52946 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdx1P52946 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdx1P52946 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pdx1P52946 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Pdx1P52946 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdx1P52946 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pdx1P52946 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdx1P52946 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdx1P52946 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdx1P52946 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdx1P52946 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdx1P52946 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdx1P52946 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdx1P52946 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdx1P52946 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdx1P52946 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdx1P52946 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdx1P52946 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pdx1P52946 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdx1P52946 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.31□□□□□ -0.6
Pdx1P52946 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pdx1P52946 Gm16166-201ENSMUST00000118291 787 ntBASIC11.31□□□□□ -0.6
Pdx1P52946 Gm15374-201ENSMUST00000119313 844 ntBASIC11.31□□□□□ -0.6
Pdx1P52946 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.31□□□□□ -0.6
Pdx1P52946 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.31□□□□□ -0.6
Pdx1P52946 Gm11244-201ENSMUST00000121243 237 ntBASIC11.31□□□□□ -0.6
Pdx1P52946 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.31□□□□□ -0.6
Pdx1P52946 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pdx1P52946 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.31□□□□□ -0.6
Pdx1P52946 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.31□□□□□ -0.6
Pdx1P52946 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdx1P52946 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdx1P52946 Gm4654-201ENSMUST00000183305 982 ntBASIC11.31□□□□□ -0.6
Pdx1P52946 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pdx1P52946 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.31□□□□□ -0.6
Pdx1P52946 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.31□□□□□ -0.6
Pdx1P52946 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Pdx1P52946 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdx1P52946 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pdx1P52946 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdx1P52946 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdx1P52946 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdx1P52946 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdx1P52946 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.31□□□□□ -0.6
Pdx1P52946 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdx1P52946 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.31□□□□□ -0.6
Pdx1P52946 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdx1P52946 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdx1P52946 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pdx1P52946 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdx1P52946 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.3□□□□□ -0.6
Pdx1P52946 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdx1P52946 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdx1P52946 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdx1P52946 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pdx1P52946 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pdx1P52946 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Pdx1P52946 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdx1P52946 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.3□□□□□ -0.6
Pdx1P52946 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdx1P52946 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Pdx1P52946 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.3□□□□□ -0.6
Pdx1P52946 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Pdx1P52946 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdx1P52946 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Pdx1P52946 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pdx1P52946 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdx1P52946 Gm25148-201ENSMUST00000104611 123 ntBASIC11.3□□□□□ -0.6
Pdx1P52946 Gm13408-201ENSMUST00000119822 798 ntBASIC11.3□□□□□ -0.6
Pdx1P52946 Gm13935-201ENSMUST00000121859 798 ntBASIC11.3□□□□□ -0.6
Pdx1P52946 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.3□□□□□ -0.6
Pdx1P52946 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.3□□□□□ -0.6
Pdx1P52946 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.3□□□□□ -0.6
Pdx1P52946 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdx1P52946 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.3□□□□□ -0.6
Pdx1P52946 Gm43186-201ENSMUST00000198130 824 ntBASIC11.3□□□□□ -0.6
Pdx1P52946 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.3□□□□□ -0.6
Pdx1P52946 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.3□□□□□ -0.6
Pdx1P52946 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.3□□□□□ -0.6
Pdx1P52946 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdx1P52946 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdx1P52946 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Pdx1P52946 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdx1P52946 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdx1P52946 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pdx1P52946 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdx1P52946 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdx1P52946 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdx1P52946 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms