Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.04□□□□□ -0.48
SftpdP50404 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SftpdP50404 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SftpdP50404 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SftpdP50404 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SftpdP50404 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.04□□□□□ -0.48
SftpdP50404 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SftpdP50404 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.04□□□□□ -0.48
SftpdP50404 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SftpdP50404 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SftpdP50404 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.04□□□□□ -0.48
SftpdP50404 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
SftpdP50404 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SftpdP50404 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SftpdP50404 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SftpdP50404 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SftpdP50404 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SftpdP50404 Gm11331-201ENSMUST00000119764 288 ntBASIC12.04□□□□□ -0.48
SftpdP50404 Gm11836-201ENSMUST00000121022 441 ntBASIC12.04□□□□□ -0.48
SftpdP50404 Gm11244-201ENSMUST00000121243 237 ntBASIC12.04□□□□□ -0.48
SftpdP50404 Gm15329-201ENSMUST00000121408 155 ntBASIC12.04□□□□□ -0.48
SftpdP50404 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SftpdP50404 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.04□□□□□ -0.48
SftpdP50404 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.04□□□□□ -0.48
SftpdP50404 Gm26461-201ENSMUST00000175064 290 ntBASIC12.04□□□□□ -0.48
SftpdP50404 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SftpdP50404 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
SftpdP50404 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SftpdP50404 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.04□□□□□ -0.48
SftpdP50404 Gm45856-201ENSMUST00000212752 416 ntBASIC12.04□□□□□ -0.48
SftpdP50404 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.04□□□□□ -0.48
SftpdP50404 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SftpdP50404 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
SftpdP50404 Olfr584-201ENSMUST00000098210 964 ntBASIC12.04□□□□□ -0.48
SftpdP50404 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SftpdP50404 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SftpdP50404 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SftpdP50404 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SftpdP50404 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SftpdP50404 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SftpdP50404 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
SftpdP50404 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SftpdP50404 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpdP50404 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpdP50404 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.03□□□□□ -0.48
SftpdP50404 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpdP50404 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpdP50404 Gm45416-201ENSMUST00000209713 2201 ntBASIC12.03□□□□□ -0.48
SftpdP50404 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
SftpdP50404 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpdP50404 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpdP50404 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.03□□□□□ -0.48
SftpdP50404 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SftpdP50404 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
SftpdP50404 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpdP50404 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.03□□□□□ -0.48
SftpdP50404 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpdP50404 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.03□□□□□ -0.48
SftpdP50404 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.03□□□□□ -0.48
SftpdP50404 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.03□□□□□ -0.48
SftpdP50404 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SftpdP50404 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpdP50404 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.03□□□□□ -0.48
SftpdP50404 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SftpdP50404 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.03□□□□□ -0.48
SftpdP50404 Gm20426-201ENSMUST00000173657 440 ntBASIC12.03□□□□□ -0.48
SftpdP50404 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.03□□□□□ -0.48
SftpdP50404 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.03□□□□□ -0.48
SftpdP50404 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.03□□□□□ -0.48
SftpdP50404 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.03□□□□□ -0.48
SftpdP50404 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.03□□□□□ -0.48
SftpdP50404 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12.03□□□□□ -0.48
SftpdP50404 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.03□□□□□ -0.48
SftpdP50404 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.03□□□□□ -0.48
SftpdP50404 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
SftpdP50404 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SftpdP50404 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpdP50404 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
SftpdP50404 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpdP50404 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
SftpdP50404 Btrc-209ENSMUST00000224478 2194 ntBASIC12.03□□□□□ -0.48
SftpdP50404 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SftpdP50404 Gm28424-201ENSMUST00000187393 1319 ntBASIC12.03□□□□□ -0.48
SftpdP50404 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SftpdP50404 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SftpdP50404 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpdP50404 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
SftpdP50404 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SftpdP50404 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SftpdP50404 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SftpdP50404 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpdP50404 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SftpdP50404 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpdP50404 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpdP50404 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpdP50404 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpdP50404 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SftpdP50404 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SftpdP50404 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
SftpdP50404 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms