Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox2P48432 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Sox2P48432 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox2P48432 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Sox2P48432 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sox2P48432 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox2P48432 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.7□□□□□ -0.7
Sox2P48432 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Sox2P48432 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC10.7□□□□□ -0.7
Sox2P48432 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Sox2P48432 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox2P48432 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Sox2P48432 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Sox2P48432 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox2P48432 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.69□□□□□ -0.7
Sox2P48432 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox2P48432 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox2P48432 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox2P48432 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Sox2P48432 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.69□□□□□ -0.7
Sox2P48432 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.69□□□□□ -0.7
Sox2P48432 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Sox2P48432 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
Sox2P48432 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox2P48432 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Sox2P48432 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sox2P48432 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC10.69□□□□□ -0.7
Sox2P48432 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox2P48432 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.69□□□□□ -0.7
Sox2P48432 Gm12463-201ENSMUST00000118271 849 ntBASIC10.69□□□□□ -0.7
Sox2P48432 Gm11660-201ENSMUST00000120955 412 ntBASIC10.69□□□□□ -0.7
Sox2P48432 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sox2P48432 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC10.69□□□□□ -0.7
Sox2P48432 Mir1982-201ENSMUST00000157368 74 ntBASIC10.69□□□□□ -0.7
Sox2P48432 Snora78-201ENSMUST00000158630 128 ntBASIC10.69□□□□□ -0.7
Sox2P48432 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.69□□□□□ -0.7
Sox2P48432 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.69□□□□□ -0.7
Sox2P48432 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Sox2P48432 Gm6450-201ENSMUST00000200896 574 ntBASIC10.69□□□□□ -0.7
Sox2P48432 Gm43962-201ENSMUST00000203898 190 ntBASIC10.69□□□□□ -0.7
Sox2P48432 Rps4l-202ENSMUST00000204242 789 ntBASIC10.69□□□□□ -0.7
Sox2P48432 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox2P48432 Gm45598-202ENSMUST00000210719 986 ntBASIC10.69□□□□□ -0.7
Sox2P48432 AC130829.1-201ENSMUST00000221548 494 ntBASIC10.69□□□□□ -0.7
Sox2P48432 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.69□□□□□ -0.7
Sox2P48432 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.69□□□□□ -0.7
Sox2P48432 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox2P48432 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Sox2P48432 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox2P48432 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC10.69□□□□□ -0.7
Sox2P48432 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox2P48432 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Sox2P48432 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox2P48432 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.69□□□□□ -0.7
Sox2P48432 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Sox2P48432 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox2P48432 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox2P48432 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sox2P48432 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Sox2P48432 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox2P48432 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Sox2P48432 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sox2P48432 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox2P48432 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Sox2P48432 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.68□□□□□ -0.7
Sox2P48432 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.68□□□□□ -0.7
Sox2P48432 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Sox2P48432 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Sox2P48432 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Sox2P48432 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 Gm26286-201ENSMUST00000104166 134 ntBASIC10.68□□□□□ -0.7
Sox2P48432 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC10.68□□□□□ -0.7
Sox2P48432 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.68□□□□□ -0.7
Sox2P48432 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.68□□□□□ -0.7
Sox2P48432 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.68□□□□□ -0.7
Sox2P48432 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC10.68□□□□□ -0.7
Sox2P48432 Mir8093-201ENSMUST00000185043 137 ntBASIC10.68□□□□□ -0.7
Sox2P48432 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.68□□□□□ -0.7
Sox2P48432 Gm5982-201ENSMUST00000196234 512 ntBASIC10.68□□□□□ -0.7
Sox2P48432 Gm2553-201ENSMUST00000215986 605 ntBASIC10.68□□□□□ -0.7
Sox2P48432 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms