Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HttP42859 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
HttP42859 Mcph1-205ENSMUST00000146819 2067 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HttP42859 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HttP42859 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.78□□□□□ -0.52
HttP42859 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HttP42859 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
HttP42859 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HttP42859 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HttP42859 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
HttP42859 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HttP42859 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HttP42859 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HttP42859 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HttP42859 Igsf5-204ENSMUST00000113795 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
HttP42859 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
HttP42859 Gm27383-201ENSMUST00000184418 361 ntBASIC11.77□□□□□ -0.52
HttP42859 Gm28391-201ENSMUST00000185202 379 ntBASIC11.77□□□□□ -0.52
HttP42859 Gm29528-201ENSMUST00000186699 379 ntBASIC11.77□□□□□ -0.52
HttP42859 Gm29526-201ENSMUST00000187217 379 ntBASIC11.77□□□□□ -0.52
HttP42859 Gm40414-201ENSMUST00000197608 481 ntBASIC11.77□□□□□ -0.52
HttP42859 Gm44159-201ENSMUST00000204065 442 ntBASIC11.77□□□□□ -0.52
HttP42859 Olfr649-201ENSMUST00000060440 939 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
HttP42859 Gm10617-201ENSMUST00000098368 1172 ntBASIC11.77□□□□□ -0.52
HttP42859 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
HttP42859 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
HttP42859 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
HttP42859 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
HttP42859 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
HttP42859 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC11.77□□□□□ -0.52
HttP42859 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
HttP42859 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
HttP42859 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
HttP42859 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
HttP42859 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
HttP42859 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
HttP42859 Gm26021-201ENSMUST00000158664 131 ntBASIC11.77□□□□□ -0.53
HttP42859 Gm1758-201ENSMUST00000164528 606 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
HttP42859 Gm25735-201ENSMUST00000175164 215 ntBASIC11.77□□□□□ -0.53
HttP42859 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
HttP42859 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HttP42859 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
HttP42859 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
HttP42859 Mrps33-202ENSMUST00000114797 500 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
HttP42859 Gm5400-201ENSMUST00000118494 943 ntBASIC11.77□□□□□ -0.53
HttP42859 1700030A11Rik-201ENSMUST00000125317 888 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
HttP42859 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC11.77□□□□□ -0.53
HttP42859 Scgb1b21-201ENSMUST00000170232 268 ntBASIC11.77□□□□□ -0.53
HttP42859 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC11.77□□□□□ -0.53
HttP42859 B130024G19Rik-204ENSMUST00000191084 634 ntTSL 5 BASIC11.77□□□□□ -0.53
HttP42859 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HttP42859 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
HttP42859 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HttP42859 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
HttP42859 Gm45110-201ENSMUST00000205704 1402 ntBASIC11.77□□□□□ -0.53
HttP42859 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
HttP42859 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HttP42859 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HttP42859 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
HttP42859 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HttP42859 Gm22751-201ENSMUST00000102077 109 ntBASIC11.76□□□□□ -0.53
HttP42859 Mir692-3-201ENSMUST00000102079 109 ntBASIC11.76□□□□□ -0.53
HttP42859 Mir692-2-201ENSMUST00000102081 109 ntBASIC11.76□□□□□ -0.53
HttP42859 Gm436-201ENSMUST00000105747 1224 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
HttP42859 Clec4n-202ENSMUST00000112554 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
HttP42859 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
HttP42859 Gm13217-201ENSMUST00000120466 953 ntBASIC11.76□□□□□ -0.53
HttP42859 Gm2021-201ENSMUST00000190623 464 ntBASIC11.76□□□□□ -0.53
HttP42859 A430073D23Rik-201ENSMUST00000196262 665 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
HttP42859 Clec4n-206ENSMUST00000205129 363 ntTSL 5 BASIC11.76□□□□□ -0.53
HttP42859 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HttP42859 Gm42815-201ENSMUST00000198787 1470 ntBASIC11.76□□□□□ -0.53
HttP42859 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
HttP42859 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
HttP42859 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
HttP42859 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
HttP42859 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
HttP42859 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
HttP42859 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
HttP42859 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
HttP42859 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HttP42859 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
HttP42859 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
HttP42859 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.76□□□□□ -0.53
HttP42859 Hspa12b-202ENSMUST00000100763 628 ntTSL 2 BASIC11.76□□□□□ -0.53
HttP42859 Snora68-201ENSMUST00000104375 131 ntBASIC11.76□□□□□ -0.53
HttP42859 Gm37944-201ENSMUST00000194233 414 ntBASIC11.76□□□□□ -0.53
HttP42859 Gm6426-201ENSMUST00000209048 854 ntBASIC11.76□□□□□ -0.53
HttP42859 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HttP42859 Gm44664-201ENSMUST00000206841 1786 ntBASIC11.76□□□□□ -0.53
HttP42859 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HttP42859 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
HttP42859 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HttP42859 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
HttP42859 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
HttP42859 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
HttP42859 Eddm3b-201ENSMUST00000100645 1412 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HttP42859 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
HttP42859 AI506816-201ENSMUST00000197153 474 ntTSL 5 BASIC11.75□□□□□ -0.53
HttP42859 Cxcr1-201ENSMUST00000053389 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms