Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Nsmce2-201ENSMUST00000079703 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1P40201 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1P40201 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1P40201 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Chd1P40201 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1P40201 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1P40201 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.79■□□□□ 0.28
Chd1P40201 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1P40201 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1P40201 Galntl5-202ENSMUST00000114965 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1P40201 Gm38034-201ENSMUST00000193915 2069 ntBASIC16.79■□□□□ 0.28
Chd1P40201 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1P40201 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1P40201 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1P40201 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1P40201 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1P40201 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC16.79■□□□□ 0.28
Chd1P40201 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC16.79■□□□□ 0.28
Chd1P40201 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1P40201 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1P40201 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Chd1P40201 Mir704-201ENSMUST00000102106 77 ntBASIC16.79■□□□□ 0.28
Chd1P40201 Gm20467-201ENSMUST00000172872 994 ntTSL 3 BASIC16.79■□□□□ 0.28
Chd1P40201 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1P40201 Mir6981-201ENSMUST00000184293 115 ntBASIC16.79■□□□□ 0.28
Chd1P40201 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1P40201 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1P40201 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1P40201 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1P40201 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1P40201 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1P40201 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1P40201 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1P40201 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Chd1P40201 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1P40201 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC16.78■□□□□ 0.28
Chd1P40201 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd1P40201 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd1P40201 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Chd1P40201 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chd1P40201 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd1P40201 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chd1P40201 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd1P40201 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd1P40201 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd1P40201 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Chd1P40201 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Chd1P40201 AC154747.3-201ENSMUST00000224471 3470 ntBASIC16.78■□□□□ 0.28
Chd1P40201 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd1P40201 Gm12774-201ENSMUST00000117881 416 ntBASIC16.78■□□□□ 0.28
Chd1P40201 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd1P40201 Rpl7a-ps12-201ENSMUST00000120384 794 ntBASIC16.78■□□□□ 0.28
Chd1P40201 Defa-ps16-201ENSMUST00000121939 171 ntBASIC16.78■□□□□ 0.28
Chd1P40201 Plxna4os3-201ENSMUST00000127668 269 ntTSL 3 BASIC16.78■□□□□ 0.28
Chd1P40201 Gm23999-201ENSMUST00000158057 104 ntBASIC16.78■□□□□ 0.28
Chd1P40201 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Chd1P40201 Gm15664-201ENSMUST00000160167 184 ntBASIC16.78■□□□□ 0.28
Chd1P40201 Gm43667-201ENSMUST00000198616 1095 ntBASIC16.78■□□□□ 0.28
Chd1P40201 Gm8174-201ENSMUST00000064353 1001 ntBASIC16.78■□□□□ 0.28
Chd1P40201 Gm7061-201ENSMUST00000118127 1416 ntBASIC16.78■□□□□ 0.28
Chd1P40201 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd1P40201 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Chd1P40201 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Chd1P40201 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd1P40201 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd1P40201 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC16.77■□□□□ 0.28
Chd1P40201 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chd1P40201 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC16.77■□□□□ 0.28
Chd1P40201 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chd1P40201 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chd1P40201 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.77■□□□□ 0.28
Chd1P40201 Gm3836-201ENSMUST00000211377 1613 ntBASIC16.77■□□□□ 0.28
Chd1P40201 Ube2l3-203ENSMUST00000115700 571 ntTSL 5 BASIC16.77■□□□□ 0.28
Chd1P40201 Gm12397-201ENSMUST00000117674 615 ntBASIC16.77■□□□□ 0.28
Chd1P40201 Gm5244-201ENSMUST00000164001 339 ntBASIC16.77■□□□□ 0.28
Chd1P40201 Gm26698-201ENSMUST00000181290 971 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Chd1P40201 AC155300.1-201ENSMUST00000219134 480 ntBASIC16.77■□□□□ 0.28
Chd1P40201 3830406C13Rik-205ENSMUST00000223702 900 ntBASIC16.77■□□□□ 0.28
Chd1P40201 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chd1P40201 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chd1P40201 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chd1P40201 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chd1P40201 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Chd1P40201 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chd1P40201 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Chd1P40201 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC16.77■□□□□ 0.27
Chd1P40201 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
Chd1P40201 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chd1P40201 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Chd1P40201 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chd1P40201 Slc25a14-208ENSMUST00000177710 1516 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chd1P40201 Gm13792-201ENSMUST00000121350 423 ntBASIC16.76■□□□□ 0.27
Chd1P40201 Gm12796-201ENSMUST00000131864 344 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chd1P40201 Gm43122-202ENSMUST00000202259 526 ntTSL 2 BASIC16.76■□□□□ 0.27
Chd1P40201 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chd1P40201 CR974487.1-201ENSMUST00000220984 413 ntBASIC16.76■□□□□ 0.27
Chd1P40201 AC192333.3-201ENSMUST00000224041 463 ntBASIC16.76■□□□□ 0.27
Chd1P40201 AC154461.3-201ENSMUST00000224831 573 ntBASIC16.76■□□□□ 0.27
Chd1P40201 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd1P40201 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms