Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cdh4P39038 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh4P39038 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.01□□□□□ -0.65
Cdh4P39038 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Cdh4P39038 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Cdh4P39038 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh4P39038 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh4P39038 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh4P39038 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh4P39038 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Cdh4P39038 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cdh4P39038 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh4P39038 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh4P39038 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cdh4P39038 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh4P39038 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh4P39038 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.01□□□□□ -0.65
Cdh4P39038 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdh4P39038 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cdh4P39038 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cdh4P39038 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Cdh4P39038 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh4P39038 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh4P39038 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh4P39038 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Cdh4P39038 n-R5s64-201ENSMUST00000102019 119 ntBASIC11□□□□□ -0.65
Cdh4P39038 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11□□□□□ -0.65
Cdh4P39038 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11□□□□□ -0.65
Cdh4P39038 Gm11956-201ENSMUST00000119525 512 ntBASIC11□□□□□ -0.65
Cdh4P39038 Gm12201-201ENSMUST00000120657 1234 ntBASIC11□□□□□ -0.65
Cdh4P39038 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11□□□□□ -0.65
Cdh4P39038 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh4P39038 Gm9211-201ENSMUST00000182882 975 ntBASIC11□□□□□ -0.65
Cdh4P39038 Gm37986-201ENSMUST00000193285 383 ntBASIC11□□□□□ -0.65
Cdh4P39038 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cdh4P39038 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cdh4P39038 Gm43852-201ENSMUST00000202098 917 ntBASIC11□□□□□ -0.65
Cdh4P39038 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh4P39038 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cdh4P39038 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh4P39038 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cdh4P39038 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11□□□□□ -0.65
Cdh4P39038 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh4P39038 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh4P39038 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh4P39038 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cdh4P39038 Gm42498-201ENSMUST00000199981 1372 ntBASIC11□□□□□ -0.65
Cdh4P39038 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh4P39038 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cdh4P39038 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cdh4P39038 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh4P39038 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cdh4P39038 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh4P39038 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh4P39038 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh4P39038 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdh4P39038 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh4P39038 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh4P39038 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Cdh4P39038 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.99□□□□□ -0.65
Cdh4P39038 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
Cdh4P39038 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh4P39038 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh4P39038 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh4P39038 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Cdh4P39038 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh4P39038 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh4P39038 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh4P39038 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh4P39038 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.99□□□□□ -0.65
Cdh4P39038 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC10.99□□□□□ -0.65
Cdh4P39038 Gm22711-201ENSMUST00000116890 133 ntBASIC10.99□□□□□ -0.65
Cdh4P39038 Gm14071-201ENSMUST00000117817 509 ntBASIC10.99□□□□□ -0.65
Cdh4P39038 Gm4726-201ENSMUST00000135604 736 ntBASIC10.99□□□□□ -0.65
Cdh4P39038 Gm6019-201ENSMUST00000148369 736 ntBASIC10.99□□□□□ -0.65
Cdh4P39038 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC10.99□□□□□ -0.65
Cdh4P39038 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC10.99□□□□□ -0.65
Cdh4P39038 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh4P39038 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC10.99□□□□□ -0.65
Cdh4P39038 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh4P39038 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.99□□□□□ -0.65
Cdh4P39038 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.99□□□□□ -0.65
Cdh4P39038 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC10.99□□□□□ -0.65
Cdh4P39038 Gm17831-201ENSMUST00000205579 900 ntBASIC10.99□□□□□ -0.65
Cdh4P39038 Gm8959-201ENSMUST00000213150 571 ntBASIC10.99□□□□□ -0.65
Cdh4P39038 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh4P39038 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh4P39038 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Cdh4P39038 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh4P39038 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Cdh4P39038 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh4P39038 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh4P39038 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.99□□□□□ -0.65
Cdh4P39038 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh4P39038 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh4P39038 CT009489.1-201ENSMUST00000227740 1893 ntBASIC10.99□□□□□ -0.65
Cdh4P39038 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Cdh4P39038 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Cdh4P39038 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cdh4P39038 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms