Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm18893-201ENSMUST00000198416 943 ntBASIC10.5□□□□□ -0.73
Nedd8P29595 Gm44855-201ENSMUST00000205725 362 ntBASIC10.5□□□□□ -0.73
Nedd8P29595 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.5□□□□□ -0.73
Nedd8P29595 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nedd8P29595 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Nedd8P29595 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nedd8P29595 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nedd8P29595 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.5□□□□□ -0.73
Nedd8P29595 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Nedd8P29595 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nedd8P29595 Gm38357-201ENSMUST00000195382 2464 ntBASIC10.5□□□□□ -0.73
Nedd8P29595 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nedd8P29595 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nedd8P29595 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC10.5□□□□□ -0.73
Nedd8P29595 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nedd8P29595 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Nedd8P29595 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nedd8P29595 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nedd8P29595 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nedd8P29595 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Nedd8P29595 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC10.5□□□□□ -0.73
Nedd8P29595 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nedd8P29595 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nedd8P29595 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Nedd8P29595 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nedd8P29595 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.49□□□□□ -0.73
Nedd8P29595 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nedd8P29595 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Nedd8P29595 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nedd8P29595 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nedd8P29595 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Nedd8P29595 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nedd8P29595 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nedd8P29595 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Nedd8P29595 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nedd8P29595 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nedd8P29595 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nedd8P29595 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nedd8P29595 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nedd8P29595 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nedd8P29595 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nedd8P29595 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nedd8P29595 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nedd8P29595 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nedd8P29595 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nedd8P29595 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nedd8P29595 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.49□□□□□ -0.73
Nedd8P29595 Gm4271-201ENSMUST00000174444 973 ntBASIC10.49□□□□□ -0.73
Nedd8P29595 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.49□□□□□ -0.73
Nedd8P29595 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC10.49□□□□□ -0.73
Nedd8P29595 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.49□□□□□ -0.73
Nedd8P29595 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nedd8P29595 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nedd8P29595 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Nedd8P29595 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nedd8P29595 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.49□□□□□ -0.73
Nedd8P29595 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nedd8P29595 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nedd8P29595 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nedd8P29595 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nedd8P29595 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.49□□□□□ -0.73
Nedd8P29595 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Nedd8P29595 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nedd8P29595 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nedd8P29595 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC10.49□□□□□ -0.73
Nedd8P29595 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Nedd8P29595 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nedd8P29595 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC10.48□□□□□ -0.73
Nedd8P29595 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nedd8P29595 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nedd8P29595 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.48□□□□□ -0.73
Nedd8P29595 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nedd8P29595 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nedd8P29595 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nedd8P29595 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nedd8P29595 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Nedd8P29595 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Nedd8P29595 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nedd8P29595 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nedd8P29595 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC10.48□□□□□ -0.73
Nedd8P29595 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Nedd8P29595 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nedd8P29595 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nedd8P29595 Gm7722-201ENSMUST00000120646 741 ntBASIC10.48□□□□□ -0.73
Nedd8P29595 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC10.48□□□□□ -0.73
Nedd8P29595 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.48□□□□□ -0.73
Nedd8P29595 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.48□□□□□ -0.73
Nedd8P29595 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nedd8P29595 Gm8738-201ENSMUST00000172606 329 ntBASIC10.48□□□□□ -0.73
Nedd8P29595 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC10.48□□□□□ -0.73
Nedd8P29595 Gm37201-201ENSMUST00000191845 523 ntBASIC10.48□□□□□ -0.73
Nedd8P29595 Gm37597-201ENSMUST00000191853 382 ntBASIC10.48□□□□□ -0.73
Nedd8P29595 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nedd8P29595 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nedd8P29595 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Nedd8P29595 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nedd8P29595 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nedd8P29595 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nedd8P29595 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nedd8P29595 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms