Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
H2afxP27661 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
H2afxP27661 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
H2afxP27661 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
H2afxP27661 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
H2afxP27661 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
H2afxP27661 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
H2afxP27661 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
H2afxP27661 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
H2afxP27661 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
H2afxP27661 Gm42571-201ENSMUST00000201197 2464 ntBASIC11.89□□□□□ -0.51
H2afxP27661 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afxP27661 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
H2afxP27661 Sdhc-202ENSMUST00000111336 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afxP27661 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afxP27661 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.89□□□□□ -0.51
H2afxP27661 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.89□□□□□ -0.51
H2afxP27661 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afxP27661 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
H2afxP27661 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC11.89□□□□□ -0.51
H2afxP27661 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
H2afxP27661 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
H2afxP27661 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
H2afxP27661 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
H2afxP27661 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
H2afxP27661 Tmem150c-201ENSMUST00000063192 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afxP27661 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
H2afxP27661 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
H2afxP27661 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afxP27661 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afxP27661 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afxP27661 Gm23935-201ENSMUST00000102303 57 ntBASIC11.89□□□□□ -0.51
H2afxP27661 Gm24270-201ENSMUST00000102326 57 ntBASIC11.89□□□□□ -0.51
H2afxP27661 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afxP27661 Gm14832-201ENSMUST00000121289 322 ntBASIC11.89□□□□□ -0.51
H2afxP27661 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.89□□□□□ -0.51
H2afxP27661 Gm24245-201ENSMUST00000157318 57 ntBASIC11.89□□□□□ -0.51
H2afxP27661 Gm24845-201ENSMUST00000158034 109 ntBASIC11.89□□□□□ -0.51
H2afxP27661 Gm25226-201ENSMUST00000158198 123 ntBASIC11.89□□□□□ -0.51
H2afxP27661 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afxP27661 Mir8093-201ENSMUST00000185043 137 ntBASIC11.89□□□□□ -0.51
H2afxP27661 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
H2afxP27661 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
H2afxP27661 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.89□□□□□ -0.51
H2afxP27661 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
H2afxP27661 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afxP27661 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afxP27661 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
H2afxP27661 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
H2afxP27661 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
H2afxP27661 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afxP27661 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
H2afxP27661 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afxP27661 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afxP27661 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
H2afxP27661 Gm3372-201ENSMUST00000198806 1792 ntBASIC11.89□□□□□ -0.51
H2afxP27661 Stpg2-201ENSMUST00000062306 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afxP27661 Pip5k1a-201ENSMUST00000005768 3480 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
H2afxP27661 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC11.89□□□□□ -0.51
H2afxP27661 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afxP27661 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afxP27661 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC11.89□□□□□ -0.51
H2afxP27661 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
H2afxP27661 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC11.88□□□□□ -0.51
H2afxP27661 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afxP27661 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afxP27661 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afxP27661 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afxP27661 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
H2afxP27661 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afxP27661 Gramd1b-202ENSMUST00000118159 2781 ntTSL 5 BASIC11.88□□□□□ -0.51
H2afxP27661 Wars-205ENSMUST00000161410 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afxP27661 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afxP27661 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afxP27661 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
H2afxP27661 Gm10748-202ENSMUST00000194396 2379 ntBASIC11.88□□□□□ -0.51
H2afxP27661 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afxP27661 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afxP27661 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
H2afxP27661 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.88□□□□□ -0.51
H2afxP27661 Gm11591-201ENSMUST00000120063 702 ntBASIC11.88□□□□□ -0.51
H2afxP27661 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
H2afxP27661 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afxP27661 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.88□□□□□ -0.51
H2afxP27661 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.88□□□□□ -0.51
H2afxP27661 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.88□□□□□ -0.51
H2afxP27661 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afxP27661 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afxP27661 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afxP27661 Fut10-201ENSMUST00000066173 3183 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afxP27661 Klhl22-202ENSMUST00000120488 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afxP27661 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afxP27661 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
H2afxP27661 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.88□□□□□ -0.51
H2afxP27661 Il12rb2-201ENSMUST00000018485 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afxP27661 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afxP27661 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
H2afxP27661 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC11.87□□□□□ -0.51
H2afxP27661 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afxP27661 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms