Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.33□□□□□ -0.6
Srp54P14576 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Srp54P14576 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Srp54P14576 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Srp54P14576 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.33□□□□□ -0.6
Srp54P14576 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Srp54P14576 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Srp54P14576 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.32□□□□□ -0.6
Srp54P14576 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54P14576 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54P14576 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54P14576 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Srp54P14576 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54P14576 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54P14576 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.32□□□□□ -0.6
Srp54P14576 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Srp54P14576 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54P14576 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.32□□□□□ -0.6
Srp54P14576 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.32□□□□□ -0.6
Srp54P14576 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.32□□□□□ -0.6
Srp54P14576 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.32□□□□□ -0.6
Srp54P14576 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54P14576 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54P14576 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54P14576 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54P14576 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.32□□□□□ -0.6
Srp54P14576 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54P14576 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Srp54P14576 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54P14576 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54P14576 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54P14576 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54P14576 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11.32□□□□□ -0.6
Srp54P14576 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54P14576 Gm14942-201ENSMUST00000119642 336 ntBASIC11.32□□□□□ -0.6
Srp54P14576 Gm11244-201ENSMUST00000121243 237 ntBASIC11.32□□□□□ -0.6
Srp54P14576 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54P14576 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54P14576 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.32□□□□□ -0.6
Srp54P14576 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54P14576 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.32□□□□□ -0.6
Srp54P14576 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.32□□□□□ -0.6
Srp54P14576 Gm9358-201ENSMUST00000183067 927 ntBASIC11.32□□□□□ -0.6
Srp54P14576 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.32□□□□□ -0.6
Srp54P14576 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54P14576 Gm44315-201ENSMUST00000203041 219 ntBASIC11.32□□□□□ -0.6
Srp54P14576 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54P14576 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC11.32□□□□□ -0.6
Srp54P14576 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.32□□□□□ -0.6
Srp54P14576 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.32□□□□□ -0.6
Srp54P14576 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.32□□□□□ -0.6
Srp54P14576 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.32□□□□□ -0.6
Srp54P14576 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Srp54P14576 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54P14576 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Srp54P14576 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54P14576 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54P14576 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54P14576 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54P14576 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54P14576 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54P14576 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54P14576 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54P14576 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54P14576 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54P14576 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54P14576 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54P14576 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.31□□□□□ -0.6
Srp54P14576 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54P14576 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Srp54P14576 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Srp54P14576 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.31□□□□□ -0.6
Srp54P14576 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54P14576 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54P14576 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.31□□□□□ -0.6
Srp54P14576 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.31□□□□□ -0.6
Srp54P14576 Gm11700-201ENSMUST00000119409 403 ntBASIC11.31□□□□□ -0.6
Srp54P14576 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.31□□□□□ -0.6
Srp54P14576 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54P14576 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC11.31□□□□□ -0.6
Srp54P14576 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.31□□□□□ -0.6
Srp54P14576 Gm7741-201ENSMUST00000181445 989 ntBASIC11.31□□□□□ -0.6
Srp54P14576 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54P14576 Gm37458-201ENSMUST00000194055 410 ntBASIC11.31□□□□□ -0.6
Srp54P14576 Gm44329-201ENSMUST00000197469 112 ntBASIC11.31□□□□□ -0.6
Srp54P14576 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.31□□□□□ -0.6
Srp54P14576 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.31□□□□□ -0.6
Srp54P14576 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54P14576 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC11.31□□□□□ -0.6
Srp54P14576 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.31□□□□□ -0.6
Srp54P14576 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54P14576 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.31□□□□□ -0.6
Srp54P14576 Gm5451-201ENSMUST00000080545 579 ntBASIC11.31□□□□□ -0.6
Srp54P14576 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Srp54P14576 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Srp54P14576 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Srp54P14576 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Srp54P14576 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.31□□□□□ -0.6
Srp54P14576 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54P14576 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms