Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Cxcl1P12850 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC9.46□□□□□ -0.89
Cxcl1P12850 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cxcl1P12850 Gm38271-201ENSMUST00000192296 1603 ntBASIC9.46□□□□□ -0.89
Cxcl1P12850 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Cxcl1P12850 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Cxcl1P12850 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cxcl1P12850 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cxcl1P12850 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
Cxcl1P12850 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cxcl1P12850 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cxcl1P12850 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Cxcl1P12850 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cxcl1P12850 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cxcl1P12850 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cxcl1P12850 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cxcl1P12850 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cxcl1P12850 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC9.46□□□□□ -0.9
Cxcl1P12850 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cxcl1P12850 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cxcl1P12850 Igkv2-116-201ENSMUST00000199327 362 ntBASIC9.46□□□□□ -0.9
Cxcl1P12850 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC9.46□□□□□ -0.9
Cxcl1P12850 Gm4157-201ENSMUST00000211647 679 ntBASIC9.46□□□□□ -0.9
Cxcl1P12850 Gm18935-201ENSMUST00000212692 664 ntBASIC9.46□□□□□ -0.9
Cxcl1P12850 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC9.46□□□□□ -0.9
Cxcl1P12850 Gm9797-202ENSMUST00000218003 294 ntBASIC9.46□□□□□ -0.9
Cxcl1P12850 Gm6653-201ENSMUST00000218063 1288 ntBASIC9.46□□□□□ -0.9
Cxcl1P12850 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC9.46□□□□□ -0.9
Cxcl1P12850 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cxcl1P12850 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC9.46□□□□□ -0.9
Cxcl1P12850 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cxcl1P12850 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cxcl1P12850 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cxcl1P12850 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cxcl1P12850 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Cxcl1P12850 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cxcl1P12850 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cxcl1P12850 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cxcl1P12850 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Cxcl1P12850 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Cxcl1P12850 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cxcl1P12850 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cxcl1P12850 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cxcl1P12850 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Cxcl1P12850 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cxcl1P12850 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cxcl1P12850 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC9.46□□□□□ -0.9
Cxcl1P12850 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Cxcl1P12850 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC9.45□□□□□ -0.9
Cxcl1P12850 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cxcl1P12850 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cxcl1P12850 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cxcl1P12850 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cxcl1P12850 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cxcl1P12850 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Cxcl1P12850 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Cxcl1P12850 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cxcl1P12850 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC9.45□□□□□ -0.9
Cxcl1P12850 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cxcl1P12850 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cxcl1P12850 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cxcl1P12850 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Cxcl1P12850 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cxcl1P12850 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cxcl1P12850 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cxcl1P12850 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Cxcl1P12850 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Cxcl1P12850 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Cxcl1P12850 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Cxcl1P12850 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Cxcl1P12850 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Cxcl1P12850 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC9.45□□□□□ -0.9
Cxcl1P12850 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cxcl1P12850 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cxcl1P12850 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cxcl1P12850 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cxcl1P12850 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC9.45□□□□□ -0.9
Cxcl1P12850 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Cxcl1P12850 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cxcl1P12850 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Cxcl1P12850 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC9.45□□□□□ -0.9
Cxcl1P12850 Aprt-ps-201ENSMUST00000212311 505 ntBASIC9.45□□□□□ -0.9
Cxcl1P12850 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC9.45□□□□□ -0.9
Cxcl1P12850 AC113082.1-201ENSMUST00000217324 327 ntBASIC9.45□□□□□ -0.9
Cxcl1P12850 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cxcl1P12850 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cxcl1P12850 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Cxcl1P12850 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Cxcl1P12850 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Cxcl1P12850 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cxcl1P12850 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cxcl1P12850 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cxcl1P12850 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC9.45□□□□□ -0.9
Cxcl1P12850 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cxcl1P12850 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC9.45□□□□□ -0.9
Cxcl1P12850 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Cxcl1P12850 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cxcl1P12850 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cxcl1P12850 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC9.45□□□□□ -0.9
Cxcl1P12850 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms