Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
P04224 Nsd3-201ENSMUST00000084026 9945 ntAPPRIS P2 TSL 2 BASIC10.06□□□□□ -0.8
P04224 Heatr6-201ENSMUST00000001002 5614 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P04224 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
P04224 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
P04224 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P04224 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
P04224 Gm45501-201ENSMUST00000211468 2526 ntBASIC10.06□□□□□ -0.8
P04224 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P04224 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
P04224 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
P04224 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P04224 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
P04224 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
P04224 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
P04224 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC10.06□□□□□ -0.8
P04224 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
P04224 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P04224 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P04224 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
P04224 Gm15163-201ENSMUST00000120749 1302 ntBASIC10.06□□□□□ -0.8
P04224 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.06□□□□□ -0.8
P04224 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P04224 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
P04224 Gm13126-201ENSMUST00000117079 3063 ntBASIC10.05□□□□□ -0.8
P04224 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P04224 Rrp7a-201ENSMUST00000018184 4363 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P04224 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.05□□□□□ -0.8
P04224 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.05□□□□□ -0.8
P04224 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
P04224 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.05□□□□□ -0.8
P04224 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P04224 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.05□□□□□ -0.8
P04224 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
P04224 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
P04224 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
P04224 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
P04224 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.05□□□□□ -0.8
P04224 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.05□□□□□ -0.8
P04224 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
P04224 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
P04224 Gm12058-201ENSMUST00000118614 437 ntBASIC10.05□□□□□ -0.8
P04224 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC10.05□□□□□ -0.8
P04224 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P04224 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
P04224 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC10.05□□□□□ -0.8
P04224 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
P04224 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
P04224 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC10.05□□□□□ -0.8
P04224 Gm42693-201ENSMUST00000196779 631 ntBASIC10.05□□□□□ -0.8
P04224 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.05□□□□□ -0.8
P04224 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.05□□□□□ -0.8
P04224 Wdyhv1-206ENSMUST00000227142 786 ntBASIC10.05□□□□□ -0.8
P04224 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
P04224 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
P04224 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P04224 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.05□□□□□ -0.8
P04224 Tyw3-201ENSMUST00000052774 4490 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
P04224 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
P04224 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
P04224 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
P04224 Cdkl5-205ENSMUST00000198931 9796 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
P04224 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
P04224 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
P04224 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
P04224 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
P04224 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Gm21039-201ENSMUST00000223359 2012 ntBASIC10.04□□□□□ -0.8
P04224 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.04□□□□□ -0.8
P04224 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
P04224 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
P04224 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.04□□□□□ -0.8
P04224 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.04□□□□□ -0.8
P04224 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
P04224 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.04□□□□□ -0.8
P04224 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.04□□□□□ -0.8
P04224 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.04□□□□□ -0.8
P04224 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.04□□□□□ -0.8
P04224 Gm24548-201ENSMUST00000158650 108 ntBASIC10.04□□□□□ -0.8
P04224 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.04□□□□□ -0.8
P04224 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.04□□□□□ -0.8
P04224 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Gm43692-201ENSMUST00000198236 1062 ntBASIC10.04□□□□□ -0.8
P04224 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.04□□□□□ -0.8
P04224 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P04224 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms