Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf13O54965 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Rnf13O54965 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Rnf13O54965 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf13O54965 Gm27501-201ENSMUST00000183599 107 ntBASIC10.37□□□□□ -0.75
Rnf13O54965 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf13O54965 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf13O54965 Gm5982-201ENSMUST00000196234 512 ntBASIC10.37□□□□□ -0.75
Rnf13O54965 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.37□□□□□ -0.75
Rnf13O54965 Gm43962-201ENSMUST00000203898 190 ntBASIC10.37□□□□□ -0.75
Rnf13O54965 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.37□□□□□ -0.75
Rnf13O54965 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf13O54965 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.37□□□□□ -0.75
Rnf13O54965 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf13O54965 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Rnf13O54965 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf13O54965 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf13O54965 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Rnf13O54965 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf13O54965 Gm25857-201ENSMUST00000082788 129 ntBASIC10.37□□□□□ -0.75
Rnf13O54965 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf13O54965 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.37□□□□□ -0.75
Rnf13O54965 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf13O54965 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Rnf13O54965 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf13O54965 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf13O54965 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.37□□□□□ -0.75
Rnf13O54965 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf13O54965 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf13O54965 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
Rnf13O54965 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.37□□□□□ -0.75
Rnf13O54965 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf13O54965 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf13O54965 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
Rnf13O54965 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rnf13O54965 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.37□□□□□ -0.75
Rnf13O54965 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
Rnf13O54965 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf13O54965 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf13O54965 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf13O54965 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf13O54965 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf13O54965 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf13O54965 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf13O54965 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf13O54965 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf13O54965 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Rnf13O54965 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf13O54965 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Rnf13O54965 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Rnf13O54965 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Rnf13O54965 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf13O54965 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Rnf13O54965 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf13O54965 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf13O54965 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf13O54965 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Rnf13O54965 Mir8093-201ENSMUST00000185043 137 ntBASIC10.36□□□□□ -0.75
Rnf13O54965 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.36□□□□□ -0.75
Rnf13O54965 Rps4l-202ENSMUST00000204242 789 ntBASIC10.36□□□□□ -0.75
Rnf13O54965 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf13O54965 Gm6334-201ENSMUST00000207083 228 ntBASIC10.36□□□□□ -0.75
Rnf13O54965 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf13O54965 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf13O54965 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.36□□□□□ -0.75
Rnf13O54965 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.36□□□□□ -0.75
Rnf13O54965 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf13O54965 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf13O54965 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Rnf13O54965 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Rnf13O54965 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Rnf13O54965 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Rnf13O54965 Gm10478-201ENSMUST00000084451 396 ntBASIC10.36□□□□□ -0.75
Rnf13O54965 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Rnf13O54965 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Rnf13O54965 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf13O54965 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Rnf13O54965 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf13O54965 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf13O54965 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Rnf13O54965 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf13O54965 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.36□□□□□ -0.75
Rnf13O54965 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf13O54965 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf13O54965 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf13O54965 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Rnf13O54965 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rnf13O54965 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Rnf13O54965 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Rnf13O54965 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rnf13O54965 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms