Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Smarce1O54941 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarce1O54941 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarce1O54941 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC13.6□□□□□ -0.23
Smarce1O54941 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarce1O54941 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
Smarce1O54941 Gm11663-201ENSMUST00000117888 290 ntBASIC13.6□□□□□ -0.23
Smarce1O54941 Gm12129-201ENSMUST00000120104 1147 ntBASIC13.6□□□□□ -0.23
Smarce1O54941 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarce1O54941 Gm8815-201ENSMUST00000173809 620 ntBASIC13.6□□□□□ -0.23
Smarce1O54941 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarce1O54941 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarce1O54941 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarce1O54941 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Smarce1O54941 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarce1O54941 Gm28071-201ENSMUST00000190355 478 ntBASIC13.6□□□□□ -0.23
Smarce1O54941 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Smarce1O54941 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarce1O54941 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.6□□□□□ -0.23
Smarce1O54941 Gm44967-201ENSMUST00000207047 631 ntBASIC13.6□□□□□ -0.23
Smarce1O54941 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarce1O54941 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.6□□□□□ -0.23
Smarce1O54941 AC102569.1-201ENSMUST00000221563 685 ntBASIC13.6□□□□□ -0.23
Smarce1O54941 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.6□□□□□ -0.23
Smarce1O54941 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarce1O54941 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarce1O54941 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Smarce1O54941 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarce1O54941 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarce1O54941 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC13.6□□□□□ -0.23
Smarce1O54941 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarce1O54941 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarce1O54941 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC13.6□□□□□ -0.23
Smarce1O54941 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarce1O54941 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarce1O54941 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarce1O54941 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarce1O54941 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarce1O54941 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC13.6□□□□□ -0.23
Smarce1O54941 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarce1O54941 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarce1O54941 Gm9129-201ENSMUST00000218173 1689 ntBASIC13.59□□□□□ -0.23
Smarce1O54941 Gm13135-201ENSMUST00000117628 3121 ntBASIC13.59□□□□□ -0.23
Smarce1O54941 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarce1O54941 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.59□□□□□ -0.23
Smarce1O54941 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarce1O54941 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarce1O54941 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarce1O54941 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarce1O54941 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarce1O54941 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Smarce1O54941 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarce1O54941 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Smarce1O54941 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarce1O54941 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Smarce1O54941 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarce1O54941 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Smarce1O54941 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Smarce1O54941 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarce1O54941 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarce1O54941 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Smarce1O54941 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarce1O54941 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Smarce1O54941 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Smarce1O54941 Gm14127-201ENSMUST00000117906 678 ntBASIC13.59□□□□□ -0.23
Smarce1O54941 Gm13996-201ENSMUST00000118456 430 ntBASIC13.59□□□□□ -0.23
Smarce1O54941 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.59□□□□□ -0.23
Smarce1O54941 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarce1O54941 Gm10807-201ENSMUST00000177134 795 ntBASIC13.59□□□□□ -0.23
Smarce1O54941 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Smarce1O54941 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarce1O54941 Gm44415-201ENSMUST00000204151 2112 ntBASIC13.59□□□□□ -0.23
Smarce1O54941 Gm7183-201ENSMUST00000213870 1005 ntBASIC13.59□□□□□ -0.23
Smarce1O54941 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Smarce1O54941 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Smarce1O54941 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarce1O54941 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarce1O54941 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarce1O54941 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarce1O54941 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarce1O54941 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarce1O54941 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarce1O54941 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarce1O54941 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC13.59□□□□□ -0.23
Smarce1O54941 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarce1O54941 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarce1O54941 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarce1O54941 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarce1O54941 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.59□□□□□ -0.23
Smarce1O54941 Gm42427-201ENSMUST00000200473 5292 ntBASIC13.59□□□□□ -0.23
Smarce1O54941 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Smarce1O54941 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smarce1O54941 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Smarce1O54941 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Smarce1O54941 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarce1O54941 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarce1O54941 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC13.58□□□□□ -0.24
Smarce1O54941 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarce1O54941 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarce1O54941 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms