Protein–RNA interactions for Protein: O08540

Msmb, Beta-microseminoprotein, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MsmbO08540 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
MsmbO08540 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
MsmbO08540 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
MsmbO08540 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
MsmbO08540 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
MsmbO08540 Gm43242-201ENSMUST00000199507 1776 ntBASIC8.84□□□□□ -1
MsmbO08540 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC8.83□□□□□ -1
MsmbO08540 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
MsmbO08540 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
MsmbO08540 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 Gm44573-201ENSMUST00000191753 2370 ntBASIC8.83□□□□□ -1
MsmbO08540 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
MsmbO08540 Gm11949-201ENSMUST00000117640 372 ntBASIC8.83□□□□□ -1
MsmbO08540 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC8.83□□□□□ -1
MsmbO08540 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC8.83□□□□□ -1
MsmbO08540 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
MsmbO08540 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC8.83□□□□□ -1
MsmbO08540 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC8.83□□□□□ -1
MsmbO08540 Gm20495-201ENSMUST00000173902 235 ntBASIC8.83□□□□□ -1
MsmbO08540 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC8.83□□□□□ -1
MsmbO08540 Gm4654-201ENSMUST00000183305 982 ntBASIC8.83□□□□□ -1
MsmbO08540 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC8.83□□□□□ -1
MsmbO08540 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 Gm35960-201ENSMUST00000202712 767 ntBASIC8.83□□□□□ -1
MsmbO08540 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC8.83□□□□□ -1
MsmbO08540 AC125486.1-201ENSMUST00000218701 320 ntBASIC8.83□□□□□ -1
MsmbO08540 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC8.83□□□□□ -1
MsmbO08540 AC122408.1-201ENSMUST00000218949 218 ntBASIC8.83□□□□□ -1
MsmbO08540 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 AC154290.1-201ENSMUST00000223786 1240 ntBASIC8.83□□□□□ -1
MsmbO08540 Gm4978-201ENSMUST00000071565 801 ntBASIC8.83□□□□□ -1
MsmbO08540 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC8.83□□□□□ -1
MsmbO08540 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC8.83□□□□□ -1
MsmbO08540 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
MsmbO08540 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 Arhgef3-204ENSMUST00000225949 3198 ntBASIC8.83□□□□□ -1
MsmbO08540 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC8.83□□□□□ -1
MsmbO08540 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
MsmbO08540 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC8.82□□□□□ -1
MsmbO08540 AC154639.1-201ENSMUST00000224393 2849 ntBASIC8.82□□□□□ -1
MsmbO08540 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
MsmbO08540 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
MsmbO08540 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC8.82□□□□□ -1
MsmbO08540 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
MsmbO08540 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC8.82□□□□□ -1
MsmbO08540 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC8.82□□□□□ -1
MsmbO08540 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
MsmbO08540 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
MsmbO08540 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
MsmbO08540 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
MsmbO08540 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
MsmbO08540 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
MsmbO08540 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
MsmbO08540 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
MsmbO08540 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
MsmbO08540 Gm15352-201ENSMUST00000118696 270 ntBASIC8.82□□□□□ -1
MsmbO08540 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC8.82□□□□□ -1
MsmbO08540 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC8.82□□□□□ -1
MsmbO08540 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC8.82□□□□□ -1
MsmbO08540 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC8.82□□□□□ -1
MsmbO08540 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
MsmbO08540 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC8.82□□□□□ -1
MsmbO08540 D9Wsu149-201ENSMUST00000214169 594 ntBASIC8.82□□□□□ -1
MsmbO08540 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC8.82□□□□□ -1
MsmbO08540 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC8.82□□□□□ -1
MsmbO08540 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC8.82□□□□□ -1
MsmbO08540 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
MsmbO08540 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC8.82□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms