Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 AC165351.1-201ENSMUST00000219078 2020 ntBASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Fam210a-201ENSMUST00000042852 9651 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Casz1-201ENSMUST00000094464 4349 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Ehmt1-210ENSMUST00000147147 5953 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Gm12203-201ENSMUST00000118235 598 ntBASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Gm13492-201ENSMUST00000119772 665 ntBASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Gm12209-201ENSMUST00000120089 596 ntBASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Gm8810-201ENSMUST00000172895 754 ntBASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Mir6977-201ENSMUST00000184960 64 ntBASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Gm42693-201ENSMUST00000196779 631 ntBASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Gm19163-201ENSMUST00000223313 780 ntBASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 AC150560.1-201ENSMUST00000227731 1187 ntBASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Gm10146-201ENSMUST00000072739 309 ntBASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Zfp446-201ENSMUST00000045810 4615 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Gm8155-201ENSMUST00000216363 1612 ntBASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Gm18806-201ENSMUST00000207607 1775 ntBASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Pde2a-204ENSMUST00000209537 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trav8-1A0A075B641 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Prkcd-208ENSMUST00000112211 2851 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Ralgps1-201ENSMUST00000042615 6029 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Apobr-201ENSMUST00000039522 3685 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Man1b1-201ENSMUST00000042390 3755 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Ppm1f-201ENSMUST00000027373 4922 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Thbs3-202ENSMUST00000119084 2993 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Trav8-1A0A075B641 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms