Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf40aQ9R1C7 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 Gm13035-201ENSMUST00000117496 342 ntBASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 Gm11450-201ENSMUST00000121144 333 ntBASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 Gm18829-201ENSMUST00000188150 1622 ntBASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf40aQ9R1C7 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Gm15515-201ENSMUST00000117827 822 ntBASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Gm11960-201ENSMUST00000122068 925 ntBASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Gm5714-201ENSMUST00000197343 566 ntBASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 AC172027.1-201ENSMUST00000217659 337 ntBASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Prpf40aQ9R1C7 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms