Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.37□□□□□ -0.75
Sec61a2Q9JLR1 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 BC043934-202ENSMUST00000185694 2356 ntBASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 Gm11509-201ENSMUST00000117358 325 ntBASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 AC107638.1-201ENSMUST00000213690 1061 ntBASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 Gm26448-201ENSMUST00000082446 203 ntBASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Sec61a2Q9JLR1 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Gm8343-201ENSMUST00000182705 994 ntBASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Gm18038-201ENSMUST00000197900 485 ntBASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms