Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ccl28Q9JIL2 Crry-ps-201ENSMUST00000079090 1309 ntBASIC9.25□□□□□ -0.93
Ccl28Q9JIL2 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ccl28Q9JIL2 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC9.25□□□□□ -0.93
Ccl28Q9JIL2 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Ccl28Q9JIL2 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ccl28Q9JIL2 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ccl28Q9JIL2 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Ccl28Q9JIL2 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC9.25□□□□□ -0.93
Ccl28Q9JIL2 Gm43102-201ENSMUST00000201004 2324 ntBASIC9.25□□□□□ -0.93
Ccl28Q9JIL2 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ccl28Q9JIL2 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Ccl28Q9JIL2 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Gm11509-201ENSMUST00000117358 325 ntBASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Gm11500-201ENSMUST00000118237 601 ntBASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Gm5616-201ENSMUST00000165252 384 ntBASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Gm8741-201ENSMUST00000174736 384 ntBASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Gm25890-201ENSMUST00000177643 165 ntBASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Rnu1b2-201ENSMUST00000178073 165 ntBASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Rnu1b1-201ENSMUST00000178250 165 ntBASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Gm22614-201ENSMUST00000178300 165 ntBASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Gm8343-201ENSMUST00000182705 994 ntBASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Mir8093-201ENSMUST00000185043 137 ntBASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Gm7172-201ENSMUST00000218047 1152 ntBASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Gm22042-201ENSMUST00000082989 165 ntBASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Gm26110-201ENSMUST00000083971 165 ntBASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Gm45199-201ENSMUST00000207640 1507 ntBASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Gm9072-201ENSMUST00000218390 1514 ntBASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ccl28Q9JIL2 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms