Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Gm5070-201ENSMUST00000177599 862 ntBASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 CT572999.1-201ENSMUST00000220315 1260 ntBASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.86□□□□□ -0.67
Trim39Q9ESN2 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Gm14644-201ENSMUST00000116671 647 ntBASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Gm13350-201ENSMUST00000120519 479 ntBASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Gm7722-201ENSMUST00000120646 741 ntBASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Gm6963-201ENSMUST00000147879 379 ntBASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Gm7584-201ENSMUST00000175829 940 ntBASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Gm19187-201ENSMUST00000206781 892 ntBASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.85□□□□□ -0.67
Trim39Q9ESN2 CT025552.1-201ENSMUST00000224561 521 ntBASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.85□□□□□ -0.67
Trim39Q9ESN2 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim39Q9ESN2 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trim39Q9ESN2 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms