Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.27□□□□□ -0.61
Rrp8Q9DB85 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Gm15036-201ENSMUST00000118880 400 ntBASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Gm13445-201ENSMUST00000121664 307 ntBASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Gm11960-201ENSMUST00000122068 925 ntBASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Gm22846-201ENSMUST00000157706 270 ntBASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Gm25554-201ENSMUST00000158075 113 ntBASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Gm25830-201ENSMUST00000158923 132 ntBASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Gm26989-201ENSMUST00000182608 749 ntBASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Gm19587-201ENSMUST00000191395 545 ntBASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Gm42599-201ENSMUST00000201308 469 ntBASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 CT030166.5-201ENSMUST00000222249 420 ntBASIC11.26□□□□□ -0.61
Rrp8Q9DB85 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 AC130477.1-201ENSMUST00000226982 420 ntBASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rrp8Q9DB85 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Gm8111-201ENSMUST00000117659 987 ntBASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Gm11700-201ENSMUST00000119409 403 ntBASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Gm15197-201ENSMUST00000120526 478 ntBASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Mir1905-201ENSMUST00000122779 82 ntBASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC11.25□□□□□ -0.61
Rrp8Q9DB85 Gm18065-201ENSMUST00000221395 526 ntBASIC11.25□□□□□ -0.61
Rrp8Q9DB85 AC140375.1-201ENSMUST00000225421 694 ntBASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms