Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Gm22144-201ENSMUST00000157402 102 ntBASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.97□□□□□ -0.49
Chmp2aQ9DB34 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 Gm4726-201ENSMUST00000135604 736 ntBASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 Gm6019-201ENSMUST00000148369 736 ntBASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 Gm12407-201ENSMUST00000180219 324 ntBASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 Gm42997-202ENSMUST00000200321 985 ntBASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 Gm4978-201ENSMUST00000071565 801 ntBASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chmp2aQ9DB34 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.96□□□□□ -0.5
Chmp2aQ9DB34 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Chmp2aQ9DB34 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chmp2aQ9DB34 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chmp2aQ9DB34 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chmp2aQ9DB34 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chmp2aQ9DB34 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Chmp2aQ9DB34 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chmp2aQ9DB34 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chmp2aQ9DB34 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Chmp2aQ9DB34 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.5
Chmp2aQ9DB34 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Gm7150-201ENSMUST00000122032 981 ntBASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.95□□□□□ -0.5
Chmp2aQ9DB34 Mir6546-201ENSMUST00000184460 62 ntBASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms