Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Gm18059-201ENSMUST00000208073 580 ntBASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Gm45592-201ENSMUST00000209605 1043 ntBASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Stag1Q9D3E6 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Gm18294-201ENSMUST00000176980 1748 ntBASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Gm15528-201ENSMUST00000117821 864 ntBASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Mir7051-201ENSMUST00000184167 73 ntBASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Gm9884-201ENSMUST00000194343 1222 ntBASIC13.68□□□□□ -0.22
Stag1Q9D3E6 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Gm6722-201ENSMUST00000221586 390 ntBASIC13.68□□□□□ -0.22
Stag1Q9D3E6 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 n-R5s185-201ENSMUST00000083953 119 ntBASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Stag1Q9D3E6 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stag1Q9D3E6 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stag1Q9D3E6 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stag1Q9D3E6 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stag1Q9D3E6 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.67□□□□□ -0.22
Stag1Q9D3E6 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stag1Q9D3E6 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Stag1Q9D3E6 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stag1Q9D3E6 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stag1Q9D3E6 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stag1Q9D3E6 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC13.67□□□□□ -0.22
Stag1Q9D3E6 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stag1Q9D3E6 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stag1Q9D3E6 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Stag1Q9D3E6 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stag1Q9D3E6 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Stag1Q9D3E6 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC13.67□□□□□ -0.22
Stag1Q9D3E6 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Stag1Q9D3E6 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC13.67□□□□□ -0.22
Stag1Q9D3E6 Gm21778-201ENSMUST00000178779 471 ntBASIC13.67□□□□□ -0.22
Stag1Q9D3E6 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Stag1Q9D3E6 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stag1Q9D3E6 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Stag1Q9D3E6 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC13.67□□□□□ -0.22
Stag1Q9D3E6 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC13.67□□□□□ -0.22
Stag1Q9D3E6 Gm18514-201ENSMUST00000218980 436 ntBASIC13.67□□□□□ -0.22
Stag1Q9D3E6 AC153152.3-201ENSMUST00000222188 1135 ntBASIC13.67□□□□□ -0.22
Stag1Q9D3E6 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Stag1Q9D3E6 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stag1Q9D3E6 Gm16380-201ENSMUST00000077997 478 ntBASIC13.67□□□□□ -0.22
Stag1Q9D3E6 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Stag1Q9D3E6 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stag1Q9D3E6 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Stag1Q9D3E6 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms