Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Gm43372-201ENSMUST00000202662 3016 ntBASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Gm45597-201ENSMUST00000211524 1994 ntBASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim42Q9D2H5 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Gm11960-201ENSMUST00000122068 925 ntBASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Gm7809-201ENSMUST00000153199 742 ntBASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trim42Q9D2H5 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Gm21115-201ENSMUST00000187565 2578 ntBASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC11.54□□□□□ -0.56
Trim42Q9D2H5 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms