Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc80Q9D0F1 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc80Q9D0F1 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc80Q9D0F1 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc80Q9D0F1 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc80Q9D0F1 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc80Q9D0F1 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Ndc80Q9D0F1 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Ndc80Q9D0F1 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc80Q9D0F1 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc80Q9D0F1 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc80Q9D0F1 Gm12997-201ENSMUST00000120207 640 ntBASIC11.71□□□□□ -0.53
Ndc80Q9D0F1 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc80Q9D0F1 Gm28450-201ENSMUST00000187349 638 ntBASIC11.71□□□□□ -0.53
Ndc80Q9D0F1 Gm29199-201ENSMUST00000187766 775 ntBASIC11.71□□□□□ -0.53
Ndc80Q9D0F1 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.71□□□□□ -0.53
Ndc80Q9D0F1 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.71□□□□□ -0.53
Ndc80Q9D0F1 Gm2965-201ENSMUST00000198365 343 ntBASIC11.71□□□□□ -0.53
Ndc80Q9D0F1 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.71□□□□□ -0.53
Ndc80Q9D0F1 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.71□□□□□ -0.53
Ndc80Q9D0F1 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.71□□□□□ -0.53
Ndc80Q9D0F1 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.71□□□□□ -0.53
Ndc80Q9D0F1 Gm7940-201ENSMUST00000218195 769 ntBASIC11.71□□□□□ -0.53
Ndc80Q9D0F1 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.71□□□□□ -0.53
Ndc80Q9D0F1 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Ndc80Q9D0F1 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ndc80Q9D0F1 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc80Q9D0F1 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc80Q9D0F1 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ndc80Q9D0F1 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.71□□□□□ -0.54
Ndc80Q9D0F1 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ndc80Q9D0F1 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ndc80Q9D0F1 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.71□□□□□ -0.54
Ndc80Q9D0F1 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ndc80Q9D0F1 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Ndc80Q9D0F1 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Ndc80Q9D0F1 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ndc80Q9D0F1 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ndc80Q9D0F1 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ndc80Q9D0F1 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ndc80Q9D0F1 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ndc80Q9D0F1 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ndc80Q9D0F1 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ndc80Q9D0F1 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.71□□□□□ -0.54
Ndc80Q9D0F1 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ndc80Q9D0F1 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ndc80Q9D0F1 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.71□□□□□ -0.54
Ndc80Q9D0F1 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ndc80Q9D0F1 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Ndc80Q9D0F1 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ndc80Q9D0F1 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ndc80Q9D0F1 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Gm12501-201ENSMUST00000119163 529 ntBASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Gm8815-201ENSMUST00000173809 620 ntBASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Gm16505-201ENSMUST00000179981 232 ntBASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Gm38314-201ENSMUST00000195709 625 ntBASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Gm21811-201ENSMUST00000096485 930 ntBASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Ndc80Q9D0F1 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc80Q9D0F1 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.69□□□□□ -0.54
Ndc80Q9D0F1 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ndc80Q9D0F1 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc80Q9D0F1 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc80Q9D0F1 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc80Q9D0F1 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc80Q9D0F1 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc80Q9D0F1 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc80Q9D0F1 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc80Q9D0F1 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms