Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Gm11500-201ENSMUST00000118237 601 ntBASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Gm17420-201ENSMUST00000164753 153 ntBASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Gm37424-201ENSMUST00000191727 561 ntBASIC10.34□□□□□ -0.75
Krt88Q9CPR6 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.34□□□□□ -0.75
Krt88Q9CPR6 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.34□□□□□ -0.75
Krt88Q9CPR6 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Krt88Q9CPR6 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Gm3329-201ENSMUST00000159873 556 ntBASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Gm5370-201ENSMUST00000187187 574 ntBASIC10.33□□□□□ -0.76
Krt88Q9CPR6 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Gm43118-201ENSMUST00000199149 775 ntBASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Gm5950-201ENSMUST00000213337 772 ntBASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.33□□□□□ -0.76
Krt88Q9CPR6 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Krt88Q9CPR6 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms