Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Gm21759-201ENSMUST00000178345 1828 ntBASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Gm26047-201ENSMUST00000157308 113 ntBASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Gm26047-202ENSMUST00000198840 115 ntBASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Gm38385-201ENSMUST00000194454 2351 ntBASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Prpf8Q99PV0 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Ssr1-203ENSMUST00000225246 1825 ntBASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Gm14213-201ENSMUST00000119778 768 ntBASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Mir1905-201ENSMUST00000122779 82 ntBASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 AC118639.2-201ENSMUST00000226289 223 ntBASIC9.43□□□□□ -0.9
Prpf8Q99PV0 AC102368.1-201ENSMUST00000227161 892 ntBASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Gm18294-201ENSMUST00000176980 1748 ntBASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Gm15784-201ENSMUST00000120260 1462 ntBASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Gm12943-201ENSMUST00000119616 210 ntBASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Gm34379-201ENSMUST00000195036 290 ntBASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Gm43752-201ENSMUST00000198475 697 ntBASIC9.43□□□□□ -0.9
Prpf8Q99PV0 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Gm14005-208ENSMUST00000223654 681 ntBASIC9.43□□□□□ -0.9
Prpf8Q99PV0 AC164437.3-201ENSMUST00000228323 347 ntBASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Prpf8Q99PV0 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Gm6655-201ENSMUST00000201932 1309 ntBASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Gm6630-201ENSMUST00000119199 454 ntBASIC9.42□□□□□ -0.9
Prpf8Q99PV0 Gm5909-201ENSMUST00000119768 1281 ntBASIC9.42□□□□□ -0.9
Prpf8Q99PV0 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms