Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm25154-201ENSMUST00000157123 119 ntBASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh23Q99PF4 AC163646.3-201ENSMUST00000228879 772 ntBASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdh23Q99PF4 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC11.33□□□□□ -0.6
Cdh23Q99PF4 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Sdcbp-204ENSMUST00000108374 1803 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Fthl17b-201ENSMUST00000105006 842 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Gm45808-201ENSMUST00000210701 789 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Gm5191-201ENSMUST00000222882 1236 ntBASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Gm6378-201ENSMUST00000084199 444 ntBASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Gm8754-201ENSMUST00000118391 520 ntBASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC11.32□□□□□ -0.6
Cdh23Q99PF4 2010008C14Rik-201ENSMUST00000203956 593 ntBASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Cdh23Q99PF4 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdh23Q99PF4 Gm5697-201ENSMUST00000122295 2482 ntBASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Gm6038-201ENSMUST00000154310 948 ntBASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Gm26611-201ENSMUST00000181449 785 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Gm44640-201ENSMUST00000206894 247 ntBASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Gm36172-201ENSMUST00000219852 723 ntTSL 3 BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Gm6713-201ENSMUST00000216137 1446 ntBASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Gm42651-201ENSMUST00000199851 1339 ntBASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Gm8464-202ENSMUST00000146697 1142 ntBASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Gm15419-201ENSMUST00000148654 743 ntTSL 3 BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Gm4750-201ENSMUST00000151942 1142 ntBASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Ighv1-8-201ENSMUST00000192236 293 ntBASIC11.31□□□□□ -0.6
Cdh23Q99PF4 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Gm18862-201ENSMUST00000204643 933 ntBASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 AC154585.1-201ENSMUST00000218917 997 ntBASIC11.31□□□□□ -0.6
Cdh23Q99PF4 AC129017.2-201ENSMUST00000226118 1284 ntBASIC11.31□□□□□ -0.6
Cdh23Q99PF4 AC123698.1-201ENSMUST00000227090 402 ntBASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Gm13898-201ENSMUST00000141865 610 ntBASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Gm7805-201ENSMUST00000154348 448 ntBASIC11.31□□□□□ -0.6
Cdh23Q99PF4 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Gm2328-201ENSMUST00000193525 535 ntBASIC11.31□□□□□ -0.6
Cdh23Q99PF4 Rps27-202ENSMUST00000195998 458 ntTSL 5 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms