Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm14942-201ENSMUST00000119642 336 ntBASIC10.12□□□□□ -0.79
Scrt1Q99M85 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Gm8723-201ENSMUST00000166076 820 ntBASIC10.12□□□□□ -0.79
Scrt1Q99M85 Gm8701-201ENSMUST00000169259 874 ntBASIC10.12□□□□□ -0.79
Scrt1Q99M85 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Gm26989-201ENSMUST00000182608 749 ntBASIC10.12□□□□□ -0.79
Scrt1Q99M85 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.12□□□□□ -0.79
Scrt1Q99M85 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Ap3s1-202ENSMUST00000224622 978 ntBASIC10.12□□□□□ -0.79
Scrt1Q99M85 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.12□□□□□ -0.79
Scrt1Q99M85 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Scrt1Q99M85 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.11□□□□□ -0.79
Scrt1Q99M85 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Gm11660-201ENSMUST00000120955 412 ntBASIC10.11□□□□□ -0.79
Scrt1Q99M85 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.11□□□□□ -0.79
Scrt1Q99M85 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Gm5700-201ENSMUST00000191483 989 ntBASIC10.11□□□□□ -0.79
Scrt1Q99M85 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Gm23680-201ENSMUST00000083162 164 ntBASIC10.11□□□□□ -0.79
Scrt1Q99M85 n-R5s185-201ENSMUST00000083953 119 ntBASIC10.11□□□□□ -0.79
Scrt1Q99M85 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Scrt1Q99M85 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.11□□□□□ -0.79
Scrt1Q99M85 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Scrt1Q99M85 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.1□□□□□ -0.79
Scrt1Q99M85 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms