Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Chmp1b1Q99LU0 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Gm45186-201ENSMUST00000206874 478 ntBASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.88□□□□□ -0.67
Chmp1b1Q99LU0 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Gm14028-201ENSMUST00000117434 479 ntBASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Gm27341-201ENSMUST00000183570 106 ntBASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Chmp1b1Q99LU0 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms