Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.15□□□□□ -0.46
Clp1Q99LI9 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC12.15□□□□□ -0.46
Clp1Q99LI9 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC12.15□□□□□ -0.46
Clp1Q99LI9 Trav11n-201ENSMUST00000200113 343 ntBASIC12.15□□□□□ -0.46
Clp1Q99LI9 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC12.15□□□□□ -0.46
Clp1Q99LI9 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Olfr692-202ENSMUST00000217827 1126 ntBASIC12.15□□□□□ -0.46
Clp1Q99LI9 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC12.15□□□□□ -0.46
Clp1Q99LI9 AC115304.2-201ENSMUST00000226399 332 ntBASIC12.15□□□□□ -0.46
Clp1Q99LI9 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.15□□□□□ -0.46
Clp1Q99LI9 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.15□□□□□ -0.46
Clp1Q99LI9 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.15□□□□□ -0.46
Clp1Q99LI9 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.15□□□□□ -0.46
Clp1Q99LI9 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.15□□□□□ -0.46
Clp1Q99LI9 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Clp1Q99LI9 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.15□□□□□ -0.47
Clp1Q99LI9 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clp1Q99LI9 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clp1Q99LI9 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clp1Q99LI9 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Clp1Q99LI9 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Clp1Q99LI9 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Clp1Q99LI9 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Clp1Q99LI9 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clp1Q99LI9 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clp1Q99LI9 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Clp1Q99LI9 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Clp1Q99LI9 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
Clp1Q99LI9 Gm13039-201ENSMUST00000118638 794 ntBASIC12.14□□□□□ -0.47
Clp1Q99LI9 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC12.14□□□□□ -0.47
Clp1Q99LI9 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clp1Q99LI9 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC12.14□□□□□ -0.47
Clp1Q99LI9 Gm25604-201ENSMUST00000158359 133 ntBASIC12.14□□□□□ -0.47
Clp1Q99LI9 Gm16107-201ENSMUST00000162523 862 ntBASIC12.14□□□□□ -0.47
Clp1Q99LI9 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC12.14□□□□□ -0.47
Clp1Q99LI9 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clp1Q99LI9 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC12.14□□□□□ -0.47
Clp1Q99LI9 Gm5267-201ENSMUST00000191574 1045 ntBASIC12.14□□□□□ -0.47
Clp1Q99LI9 Gm5340-201ENSMUST00000203733 880 ntBASIC12.14□□□□□ -0.47
Clp1Q99LI9 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Clp1Q99LI9 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC12.14□□□□□ -0.47
Clp1Q99LI9 Gm9102-201ENSMUST00000219250 465 ntBASIC12.14□□□□□ -0.47
Clp1Q99LI9 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clp1Q99LI9 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Clp1Q99LI9 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clp1Q99LI9 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clp1Q99LI9 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.14□□□□□ -0.47
Clp1Q99LI9 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Clp1Q99LI9 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Clp1Q99LI9 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.14□□□□□ -0.47
Clp1Q99LI9 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clp1Q99LI9 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clp1Q99LI9 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clp1Q99LI9 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clp1Q99LI9 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Clp1Q99LI9 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.14□□□□□ -0.47
Clp1Q99LI9 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clp1Q99LI9 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Clp1Q99LI9 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clp1Q99LI9 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Clp1Q99LI9 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clp1Q99LI9 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Clp1Q99LI9 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clp1Q99LI9 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clp1Q99LI9 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Clp1Q99LI9 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clp1Q99LI9 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Clp1Q99LI9 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Clp1Q99LI9 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Clp1Q99LI9 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC12.13□□□□□ -0.47
Clp1Q99LI9 Gm9372-201ENSMUST00000168454 430 ntBASIC12.13□□□□□ -0.47
Clp1Q99LI9 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Clp1Q99LI9 Mir7035-201ENSMUST00000184713 82 ntBASIC12.13□□□□□ -0.47
Clp1Q99LI9 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Clp1Q99LI9 Gm44814-201ENSMUST00000207018 434 ntBASIC12.13□□□□□ -0.47
Clp1Q99LI9 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Clp1Q99LI9 Gm44953-201ENSMUST00000208745 1286 ntBASIC12.13□□□□□ -0.47
Clp1Q99LI9 Gm3318-201ENSMUST00000217604 1183 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms