Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Gm13461-201ENSMUST00000120980 662 ntBASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Gm29499-201ENSMUST00000189151 486 ntBASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Gm28329-201ENSMUST00000191208 689 ntBASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Gm29171-201ENSMUST00000191397 486 ntBASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Gm6108-201ENSMUST00000208365 367 ntBASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga4Q91XY4 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Gm13611-201ENSMUST00000118269 318 ntBASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Gm13408-201ENSMUST00000119822 798 ntBASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Gm8199-201ENSMUST00000121323 823 ntBASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Gm13935-201ENSMUST00000121859 798 ntBASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Gm38117-201ENSMUST00000194653 939 ntBASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Gm5714-201ENSMUST00000197343 566 ntBASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Gm45575-201ENSMUST00000210283 548 ntBASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Gm8959-201ENSMUST00000213150 571 ntBASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.35□□□□□ -0.59
Pcdhga4Q91XY4 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga4Q91XY4 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms