Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim68Q8K243 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim68Q8K243 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim68Q8K243 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trim68Q8K243 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim68Q8K243 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trim68Q8K243 Gm15207-201ENSMUST00000119259 442 ntBASIC12.53□□□□□ -0.4
Trim68Q8K243 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trim68Q8K243 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim68Q8K243 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC12.53□□□□□ -0.4
Trim68Q8K243 Gm4310-201ENSMUST00000177847 889 ntBASIC12.53□□□□□ -0.4
Trim68Q8K243 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.53□□□□□ -0.4
Trim68Q8K243 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.53□□□□□ -0.4
Trim68Q8K243 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim68Q8K243 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.53□□□□□ -0.4
Trim68Q8K243 Gm19640-201ENSMUST00000214849 464 ntBASIC12.53□□□□□ -0.4
Trim68Q8K243 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim68Q8K243 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim68Q8K243 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim68Q8K243 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim68Q8K243 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim68Q8K243 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim68Q8K243 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim68Q8K243 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim68Q8K243 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.53□□□□□ -0.4
Trim68Q8K243 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trim68Q8K243 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim68Q8K243 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim68Q8K243 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim68Q8K243 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim68Q8K243 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim68Q8K243 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.53□□□□□ -0.4
Trim68Q8K243 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim68Q8K243 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim68Q8K243 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trim68Q8K243 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.52□□□□□ -0.4
Trim68Q8K243 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim68Q8K243 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trim68Q8K243 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim68Q8K243 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim68Q8K243 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim68Q8K243 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Trim68Q8K243 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim68Q8K243 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim68Q8K243 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC12.52□□□□□ -0.41
Trim68Q8K243 Gm15004-201ENSMUST00000119192 630 ntBASIC12.52□□□□□ -0.41
Trim68Q8K243 Gm11660-201ENSMUST00000120955 412 ntBASIC12.52□□□□□ -0.41
Trim68Q8K243 Gm13022-201ENSMUST00000121181 285 ntBASIC12.52□□□□□ -0.41
Trim68Q8K243 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Trim68Q8K243 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC12.52□□□□□ -0.41
Trim68Q8K243 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim68Q8K243 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim68Q8K243 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim68Q8K243 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.52□□□□□ -0.41
Trim68Q8K243 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim68Q8K243 Gm6722-201ENSMUST00000221586 390 ntBASIC12.52□□□□□ -0.41
Trim68Q8K243 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.52□□□□□ -0.41
Trim68Q8K243 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trim68Q8K243 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim68Q8K243 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim68Q8K243 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim68Q8K243 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.52□□□□□ -0.41
Trim68Q8K243 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim68Q8K243 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.52□□□□□ -0.41
Trim68Q8K243 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim68Q8K243 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim68Q8K243 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trim68Q8K243 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim68Q8K243 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trim68Q8K243 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.52□□□□□ -0.41
Trim68Q8K243 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trim68Q8K243 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim68Q8K243 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim68Q8K243 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim68Q8K243 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trim68Q8K243 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim68Q8K243 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim68Q8K243 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.51□□□□□ -0.41
Trim68Q8K243 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim68Q8K243 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim68Q8K243 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim68Q8K243 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.51□□□□□ -0.41
Trim68Q8K243 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim68Q8K243 Gm12948-201ENSMUST00000119406 682 ntBASIC12.51□□□□□ -0.41
Trim68Q8K243 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim68Q8K243 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim68Q8K243 Gm24844-201ENSMUST00000158679 127 ntBASIC12.51□□□□□ -0.41
Trim68Q8K243 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.51□□□□□ -0.41
Trim68Q8K243 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim68Q8K243 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim68Q8K243 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim68Q8K243 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.51□□□□□ -0.41
Trim68Q8K243 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.51□□□□□ -0.41
Trim68Q8K243 Gm42779-201ENSMUST00000198807 406 ntBASIC12.51□□□□□ -0.41
Trim68Q8K243 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.51□□□□□ -0.41
Trim68Q8K243 Gm18463-201ENSMUST00000207258 474 ntBASIC12.51□□□□□ -0.41
Trim68Q8K243 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim68Q8K243 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim68Q8K243 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.51□□□□□ -0.41
Trim68Q8K243 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms