Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Gm14150-201ENSMUST00000122404 1354 ntBASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vps53Q8CCB4 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.4□□□□□ -0.27
Vps53Q8CCB4 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Vps53Q8CCB4 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Vps53Q8CCB4 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps53Q8CCB4 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.39□□□□□ -0.27
Vps53Q8CCB4 AC129336.1-201ENSMUST00000220224 2277 ntBASIC13.39□□□□□ -0.27
Vps53Q8CCB4 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps53Q8CCB4 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps53Q8CCB4 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Vps53Q8CCB4 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Vps53Q8CCB4 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps53Q8CCB4 AC173482.6-201ENSMUST00000225889 1741 ntBASIC13.39□□□□□ -0.27
Vps53Q8CCB4 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps53Q8CCB4 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC13.39□□□□□ -0.27
Vps53Q8CCB4 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps53Q8CCB4 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps53Q8CCB4 Gm11509-201ENSMUST00000117358 325 ntBASIC13.39□□□□□ -0.27
Vps53Q8CCB4 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC13.39□□□□□ -0.27
Vps53Q8CCB4 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC13.39□□□□□ -0.27
Vps53Q8CCB4 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC13.39□□□□□ -0.27
Vps53Q8CCB4 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.39□□□□□ -0.27
Vps53Q8CCB4 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps53Q8CCB4 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.39□□□□□ -0.27
Vps53Q8CCB4 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC13.39□□□□□ -0.27
Vps53Q8CCB4 Gm38210-201ENSMUST00000191944 809 ntBASIC13.39□□□□□ -0.27
Vps53Q8CCB4 Gm8956-201ENSMUST00000203939 825 ntBASIC13.39□□□□□ -0.27
Vps53Q8CCB4 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC13.39□□□□□ -0.27
Vps53Q8CCB4 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC13.39□□□□□ -0.27
Vps53Q8CCB4 AC154290.1-201ENSMUST00000223786 1240 ntBASIC13.39□□□□□ -0.27
Vps53Q8CCB4 AC171241.1-201ENSMUST00000228144 1166 ntBASIC13.39□□□□□ -0.27
Vps53Q8CCB4 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps53Q8CCB4 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Vps53Q8CCB4 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.39□□□□□ -0.27
Vps53Q8CCB4 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Vps53Q8CCB4 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Vps53Q8CCB4 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps53Q8CCB4 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps53Q8CCB4 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps53Q8CCB4 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps53Q8CCB4 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps53Q8CCB4 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vps53Q8CCB4 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vps53Q8CCB4 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Gm4726-201ENSMUST00000135604 736 ntBASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Gm6019-201ENSMUST00000148369 736 ntBASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 AC151275.1-201ENSMUST00000224870 585 ntBASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vps53Q8CCB4 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vps53Q8CCB4 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms