Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Lysmd4Q8CC84 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.27□□□□□ -0.76
Lysmd4Q8CC84 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Lysmd4Q8CC84 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Lysmd4Q8CC84 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Lysmd4Q8CC84 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Lysmd4Q8CC84 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Lysmd4Q8CC84 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Lysmd4Q8CC84 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.76
Lysmd4Q8CC84 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Lysmd4Q8CC84 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Gm11222-201ENSMUST00000119005 738 ntBASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Gm15547-201ENSMUST00000122152 333 ntBASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Gm8062-201ENSMUST00000139696 444 ntBASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Gm17420-201ENSMUST00000164753 153 ntBASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Gm4310-201ENSMUST00000177847 889 ntBASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Gm43962-201ENSMUST00000203898 190 ntBASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 AC166349.1-201ENSMUST00000220866 695 ntBASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Gm37660-201ENSMUST00000192754 1732 ntBASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lysmd4Q8CC84 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Gm12742-201ENSMUST00000117326 410 ntBASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Gm27572-201ENSMUST00000183702 255 ntBASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 AY702102-202ENSMUST00000194651 1173 ntBASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Gm44008-201ENSMUST00000204345 412 ntBASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Olfr284-202ENSMUST00000206647 966 ntBASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lysmd4Q8CC84 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms